RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 IQCB1Q15051 598 aa7.2□□□□□ -1.26
LINC00871-202ENST00000556071 RBM20Q5T481 1227 aaKnown RBP7.2□□□□□ -1.26
LINC00871-202ENST00000556071 VWA1Q6PCB0 445 aa7.2□□□□□ -1.26
LINC00871-202ENST00000556071 TMEM108Q6UXF1 575 aa7.2□□□□□ -1.26
LINC00871-202ENST00000556071 TSHZ1Q6ZSZ6 1077 aa7.2□□□□□ -1.26
LINC00871-202ENST00000556071 APIPQ96GX9 242 aa7.2□□□□□ -1.26
LINC00871-202ENST00000556071 SUCLG2Q96I99 432 aa7.2□□□□□ -1.26
LINC00871-202ENST00000556071 SORCS2Q96PQ0 1159 aa7.2□□□□□ -1.26
LINC00871-202ENST00000556071 APOL5Q9BWW9 433 aa7.2□□□□□ -1.26
LINC00871-202ENST00000556071 LRRC27Q9C0I9 530 aa7.2□□□□□ -1.26
LINC00871-202ENST00000556071 KAT6AQ92794 2004 aa7.2□□□□□ -1.26
LINC00871-202ENST00000556071 ISM1B1AKI9 464 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 TMEM233B4DJY2 109 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 TRIAP1O43715 76 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 ATXN1LP0C7T5 689 aaKnown RBP7.19□□□□□ -1.26
LINC00871-202ENST00000556071 CD6P30203 668 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 INHBCP55103 352 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 CNGA2Q16280 664 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 VPS53Q5VIR6 699 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 PCSK4Q6UW60 755 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 MPP5Q8N3R9 675 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 B3GALNT2Q8NCR0 500 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 TOR1AIP2Q8NFQ8 470 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 MYCBPAPQ8TBZ2 947 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 CCDC136Q96JN2 1154 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 OSBPL9Q96SU4 736 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 SACM1LQ9NTJ5 587 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 DMTF1Q9Y222 760 aa7.19□□□□□ -1.26
LINC00871-202ENST00000556071 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.19□□□□□ -1.26
LINC00871-202ENST00000556071 YY2O15391 372 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 PROM1O43490 865 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 ESRRBO95718 433 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 MAP4K4O95819 1239 aaPredicted RBP7.18□□□□□ -1.26
LINC00871-202ENST00000556071 GCP02774 474 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 MPLP40238 635 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 PXNP49023 591 aaPredicted RBP7.18□□□□□ -1.26
LINC00871-202ENST00000556071 LOXL3P58215 753 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 MPP3Q13368 585 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 RAB32Q13637 225 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 LAYNQ6UX15 382 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 FAM109AQ8N4B1 249 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 MOGAT1Q96PD6 335 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 TPSD1Q9BZJ3 242 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 AMBRA1Q9C0C7 1298 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 TOR3AQ9H497 397 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 KIAA1586Q9HCI6 787 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 GEMIN8Q9NWZ8 242 aaKnown RBP7.18□□□□□ -1.26
LINC00871-202ENST00000556071 PACSIN3Q9UKS6 424 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 OGDHLQ9ULD0 1010 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 FAM50BQ9Y247 325 aa7.18□□□□□ -1.26
LINC00871-202ENST00000556071 PEX1O43933 1283 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 PROZP22891 400 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 ADRA1BP35368 520 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 FMO1Q01740 532 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 C3orf38Q5JPI3 329 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 SESTD1Q86VW0 696 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 MICU3Q86XE3 530 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.17□□□□□ -1.26
LINC00871-202ENST00000556071 CHFRQ96EP1 664 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 SARGQ9BW04 601 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 MRIQ9BWK5 157 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 ACTRT3Q9BYD9 372 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 KRTAP9-8Q9BYQ0 159 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 ZNF518BQ9C0D4 1074 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 MS4A7Q9GZW8 240 aaPredicted RBP7.17□□□□□ -1.26
LINC00871-202ENST00000556071 IKZF4Q9H2S9 585 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 ZNF287Q9HBT7 754 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 SALL3Q9BXA9 1300 aa7.17□□□□□ -1.26
LINC00871-202ENST00000556071 A0A087X1B8 175 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 TRIM43BA6NCK2 446 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 RHOP08100 348 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 ZKSCAN1P17029 563 aaPredicted RBP7.16□□□□□ -1.26
LINC00871-202ENST00000556071 PLA2G5P39877 138 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 WNT3P56703 355 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 TBX4P57082 545 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 TGFB2P61812 414 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 SLC44A4Q53GD3 710 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 COBLL1Q53SF7 1204 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 DCAF12L1Q5VU92 463 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 ZNF280BQ86YH2 543 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 CCAR1Q8IX12 1150 aaKnown RBP7.16□□□□□ -1.26
LINC00871-202ENST00000556071 OR56A3Q8NH54 315 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 RAPGEF4Q8WZA2 1011 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 TRIM43Q96BQ3 446 aaPredicted RBP7.16□□□□□ -1.26
LINC00871-202ENST00000556071 FAM136AQ96C01 138 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 NMD3Q96D46 503 aaKnown RBP7.16□□□□□ -1.26
LINC00871-202ENST00000556071 FBXL20Q96IG2 436 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 MESP1Q9BRJ9 268 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 COL20A1Q9P218 1284 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 AFF4Q9UHB7 1163 aaKnown RBP7.16□□□□□ -1.26
LINC00871-202ENST00000556071 SHOC2Q9UQ13 582 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 DMRT1Q9Y5R6 373 aa7.16□□□□□ -1.26
LINC00871-202ENST00000556071 VWC2LB2RUY7 222 aa7.15□□□□□ -1.26
LINC00871-202ENST00000556071 PRC1O43663 620 aa7.15□□□□□ -1.26
LINC00871-202ENST00000556071 PQBP1O60828 265 aaKnown RBP7.15□□□□□ -1.26
LINC00871-202ENST00000556071 CYP2C9P11712 490 aa7.15□□□□□ -1.26
LINC00871-202ENST00000556071 TYRP1P17643 537 aa7.15□□□□□ -1.26
LINC00871-202ENST00000556071 FOLR3P41439 243 aa7.15□□□□□ -1.26
LINC00871-202ENST00000556071 RPS16P62249 146 aaKnown RBP7.15□□□□□ -1.26
LINC00871-202ENST00000556071 ITIH3Q06033 890 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms