RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MYCBPAPQ8TBZ2 947 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 SHC3Q92529 594 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 CASP10Q92851 521 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 ELMO3Q96BJ8 720 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 TMEM176AQ96HP8 235 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 FUBP3Q96I24 572 aaKnown RBP eCLIP8.13□□□□□ -1.11
TDP1-214ENST00000556063 HEXIM2Q96MH2 286 aaKnown RBP8.13□□□□□ -1.11
TDP1-214ENST00000556063 KREMEN1Q96MU8 473 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 ARID3AQ99856 593 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 STK33Q9BYT3 514 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 IGFLR1Q9H665 355 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 ABCB6Q9NP58 842 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 SIX2Q9NPC8 291 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 DZANK1Q9NVP4 752 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 CEP72Q9P209 647 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 HSFX1Q9UBD0 423 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 GTF3C4Q9UKN8 822 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 PCDHB5Q9Y5E4 795 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 PCDHGC5Q9Y5F6 944 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 MTCL1Q9Y4B5 1905 aaKnown RBP8.13□□□□□ -1.11
TDP1-214ENST00000556063 TSC2P49815 1807 aa8.13□□□□□ -1.11
TDP1-214ENST00000556063 WDR27A2RRH5 827 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 MYBPHLA2RUH7 354 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 GOLGA6L3A6NEY3 463 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 ADAM12O43184 909 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 MED7O43513 233 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 TGM5O43548 720 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 ABLIM3O94929 683 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 VDRP11473 427 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 CD19P15391 556 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 HOXB8P17481 243 aaPredicted RBP8.12□□□□□ -1.11
TDP1-214ENST00000556063 ALDH1A3P47895 512 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 CLCN4P51793 760 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 RAD23BP54727 409 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 PSMC1P62191 440 aaKnown RBP8.12□□□□□ -1.11
TDP1-214ENST00000556063 RPL10AP62906 217 aaKnown RBP8.12□□□□□ -1.11
TDP1-214ENST00000556063 CYP27A1Q02318 531 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 PTK2Q05397 1052 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 ADCY1Q08828 1119 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 VEPH1Q14D04 833 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 STILQ15468 1287 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 SKIV2LQ15477 1246 aaKnown RBP8.12□□□□□ -1.11
TDP1-214ENST00000556063 TSR1Q2NL82 804 aaKnown RBP8.12□□□□□ -1.11
TDP1-214ENST00000556063 ZNF394Q53GI3 561 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 SGO2Q562F6 1265 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 FIGNQ5HY92 759 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 MDH1BQ5I0G3 518 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 IQCEQ6IPM2 695 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 FAM171BQ6P995 826 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 GJB7Q6PEY0 223 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 LILRA6Q6PI73 481 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 VSTM1Q6UX27 236 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 RSPO2Q6UXX9 243 aaPredicted RBP8.12□□□□□ -1.11
TDP1-214ENST00000556063 EP400NLQ6ZTU2 488 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 ADGRD2Q7Z7M1 963 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 TCEAL8Q8IYN2 117 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 RBBP8NLQ8NC74 664 aaPredicted RBP8.12□□□□□ -1.11
TDP1-214ENST00000556063 SLC22A17Q8WUG5 538 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 KAT5Q92993 513 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 GUCD1Q96NT3 240 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 RTP3Q9BQQ7 232 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 MED10Q9BTT4 135 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 ELOVL4Q9GZR5 314 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 NUCKS1Q9H1E3 243 aaKnown RBP8.12□□□□□ -1.11
TDP1-214ENST00000556063 GANQ9H2C0 597 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 CYP4F11Q9HBI6 524 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 NLRC4Q9NPP4 1024 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 ABI2Q9NYB9 513 aaPredicted RBP8.12□□□□□ -1.11
TDP1-214ENST00000556063 HESX1Q9UBX0 185 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 MYO6Q9UM54 1294 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 CNTN6Q9UQ52 1028 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 HCFC2Q9Y5Z7 792 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 FHOD1Q9Y613 1164 aa8.12□□□□□ -1.11
TDP1-214ENST00000556063 ITIH6Q6UXX5 1313 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 MTMR11A4FU01 709 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 GOLGA6L6A8MZA4 724 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 FOXN3O00409 490 aaPredicted RBP8.11□□□□□ -1.11
TDP1-214ENST00000556063 ATP2C2O75185 946 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 XYLBO75191 536 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 LRG1P02750 347 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 C8AP07357 584 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 HNRNPA1P09651 372 aaKnown RBP eCLIP8.11□□□□□ -1.11
TDP1-214ENST00000556063 OR4Q2P0C623 313 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 FERP16591 822 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 ACO1P21399 889 aaKnown RBP8.11□□□□□ -1.11
TDP1-214ENST00000556063 ANXA13P27216 316 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 SOX5P35711 763 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 MAGEA11P43364 429 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 KLK7P49862 253 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 APBA1Q02410 837 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 HYAL1Q12794 435 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 DUSP4Q13115 394 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 TAF12Q16514 161 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 MGAT5BQ3V5L5 792 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 CFAP221Q4G0U5 840 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 PPM1LQ5SGD2 360 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 ARHGAP17Q68EM7 881 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 SPECC1LQ69YQ0 1117 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 LLGL2Q6P1M3 1020 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 CYP26C1Q6V0L0 522 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms