RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 KIF3AQ9Y496 699 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CEP295Q9C0D2 2601 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 KPNA7A9QM74 516 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 DPYSL4O14531 572 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 TRDMT1O14717 391 aaKnown RBP15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 HCRTO43612 131 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ARSAP15289 507 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CASP5P51878 434 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SF3A1Q15459 793 aaKnown RBP15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SDHAF4Q5VUM1 108 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 TXNDC8Q6A555 127 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 OSTM1Q86WC4 334 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 C1orf127Q8N9H9 656 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 C2orf15Q8WU43 125 aaKnown RBP15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SLC22A12Q96S37 553 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ZHX3Q9H4I2 956 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 EBF3Q9H4W6 596 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ABI2Q9NYB9 513 aaPredicted RBP15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 L1RE1Q9UN81 338 aa15.49■□□□□ 0.07
CHMP4BP1-201ENST00000556017 MYMKA6NI61 221 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 H3BQV1 296 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 EGFP01133 1207 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 RAP1GAPP47736 663 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SMARCB1Q12824 385 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 RUNX3Q13761 415 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SF3A2Q15428 464 aaKnown RBP15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 PPM1JQ5JR12 505 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ABCA7Q8IZY2 2146 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 PDCL2Q8N4E4 241 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 MAB21L3Q8N8X9 362 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 FAM200AQ8TCP9 573 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ASPMQ8IZT6 3477 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 NUP205Q92621 2012 aa15.48■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CCDC163A0A0D9SF12 145 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 TBCAO75347 108 aaKnown RBP15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 VEPH1Q14D04 833 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CCDC6Q16204 474 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 PLA2G2CQ5R387 149 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SLFN12LQ6IEE8 588 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 DYMQ7RTS9 669 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 LIMS2Q7Z4I7 341 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 KBTBD6Q86V97 674 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 MON1AQ86VX9 555 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 LEO1Q8WVC0 666 aaPredicted RBP15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 GAB3Q8WWW8 586 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 TDP1Q9NUW8 608 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SIX4Q9UIU6 781 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 FBXO2Q9UK22 296 aaPredicted RBP15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 PCDHB5Q9Y5E4 795 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CLIC4Q9Y696 253 aa15.47■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ANTXRLA6NF34 631 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 IL18RAPO95256 599 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 KRT18P05783 430 aaKnown RBP15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CYP2F1P24903 491 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 POLR2BP30876 1174 aaKnown RBP15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 DDR2Q16832 855 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SV2CQ496J9 727 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 LARP1BQ659C4 914 aaKnown RBP15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 METTL23Q86XA0 190 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 NT5DC4Q86YG4 428 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 BRSK2Q8IWQ3 736 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 THEM5Q8N1Q8 247 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 POMGNT1Q8WZA1 660 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 HVCN1Q96D96 273 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SAAL1Q96ER3 474 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 MYRFLQ96LU7 910 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CYP2S1Q96SQ9 504 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 PI4K2AQ9BTU6 479 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ARRDC1-AS1Q9H2J1 176 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 MYOFQ9NZM1 2061 aa15.46■□□□□ 0.07
CHMP4BP1-201ENST00000556017 PTPRJQ12913 1337 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 A0A087X0B3 334 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 FRMD3A2A2Y4 597 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SOBPA7XYQ1 873 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GABRDO14764 452 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 AXIN1O15169 862 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 RNF40O75150 1001 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 NOL4O94818 638 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 EPN2O95208 641 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 BMP15O95972 392 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ITGB3P05106 788 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ACAT1P24752 427 aaKnown RBP15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 DDX6P26196 483 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ABCD1P33897 745 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GJA4P35212 333 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GALK1P51570 392 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 LIMK1P53667 647 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ZXDBP98169 803 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ZNF268Q14587 947 aaPredicted RBP15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ZNF77Q15935 545 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GAB4Q2WGN9 574 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 L1TD1Q5T7N2 865 aaKnown RBP15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 BRAPQ7Z569 592 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 DCP1BQ8IZD4 617 aaKnown RBP15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TRMT2BQ96GJ1 504 aaKnown RBP15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ZC3H10Q96K80 434 aaKnown RBP15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CLIC6Q96NY7 704 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ACBD6Q9BR61 282 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CBWD1Q9BRT8 395 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms