RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 AASDHQ4L235 1098 aaPredicted RBP18.26■□□□□ 0.51
XRCC3-215ENST00000555964 TMEM196Q5HYL7 178 aa18.26■□□□□ 0.51
XRCC3-215ENST00000555964 WDR44Q5JSH3 913 aa18.26■□□□□ 0.51
XRCC3-215ENST00000555964 LARP1BQ659C4 914 aaKnown RBP18.26■□□□□ 0.51
XRCC3-215ENST00000555964 SPATA18Q8TC71 538 aa18.26■□□□□ 0.51
XRCC3-215ENST00000555964 CACTINQ8WUQ7 758 aaKnown RBP18.26■□□□□ 0.51
XRCC3-215ENST00000555964 LEO1Q8WVC0 666 aaPredicted RBP18.26■□□□□ 0.51
XRCC3-215ENST00000555964 FAM83CQ9BQN1 747 aa18.26■□□□□ 0.51
XRCC3-215ENST00000555964 UPF2Q9HAU5 1272 aaKnown RBP18.26■□□□□ 0.51
XRCC3-215ENST00000555964 TDP1Q9NUW8 608 aa18.26■□□□□ 0.51
XRCC3-215ENST00000555964 STK17AQ9UEE5 414 aa18.26■□□□□ 0.51
XRCC3-215ENST00000555964 MAP1BP46821 2468 aaKnown RBP18.26■□□□□ 0.51
XRCC3-215ENST00000555964 ANKRD63C9JTQ0 380 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 TRDMT1O14717 391 aaKnown RBP18.25■□□□□ 0.51
XRCC3-215ENST00000555964 GAP43P17677 238 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 DRD1P21728 446 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 TXLNAP40222 546 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 MYL7Q01449 175 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 FBXO43Q4G163 708 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 ZC2HC1CQ53FD0 456 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-215ENST00000555964 TMEM86AQ8N2M4 240 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 CAMKK1Q8N5S9 505 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 MAB21L3Q8N8X9 362 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 CCDC26Q8TAB7 109 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 PCDHGA5Q9Y5G8 931 aa18.25■□□□□ 0.51
XRCC3-215ENST00000555964 HUS1O60921 280 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 PRPF40AO75400 957 aaKnown RBP18.24■□□□□ 0.51
XRCC3-215ENST00000555964 LDHAP00338 332 aaKnown RBP18.24■□□□□ 0.51
XRCC3-215ENST00000555964 ALCAMQ13740 583 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 C8orf34Q49A92 452 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 ZNF720Q7Z2F6 126 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 LRRTM3Q86VH5 581 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 MON1AQ86VX9 555 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 SFR1Q86XK3 245 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 EFCAB13Q8IY85 973 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 CPA6Q8N4T0 437 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 LRRC15Q8TF66 581 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 USP13Q92995 863 aaPredicted RBP18.24■□□□□ 0.51
XRCC3-215ENST00000555964 ACCSQ96QU6 501 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 ACBD6Q9BR61 282 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 SMG9Q9H0W8 520 aaKnown RBP18.24■□□□□ 0.51
XRCC3-215ENST00000555964 EBF3Q9H4W6 596 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 MRPL44Q9H9J2 332 aaKnown RBP18.24■□□□□ 0.51
XRCC3-215ENST00000555964 HPS4Q9NQG7 708 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 R3HCC1Q9Y3T6 440 aaKnown RBP18.24■□□□□ 0.51
XRCC3-215ENST00000555964 EML5Q05BV3 1969 aa18.24■□□□□ 0.51
XRCC3-215ENST00000555964 ANAPC1Q9H1A4 1944 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 EXTL3O43909 919 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 EPN2O95208 641 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 F11P03951 625 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 HMGA1P17096 107 aaKnown RBP18.23■□□□□ 0.51
XRCC3-215ENST00000555964 PDE6CP51160 858 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 TFAMQ00059 246 aaKnown RBP18.23■□□□□ 0.51
XRCC3-215ENST00000555964 SF3A1Q15459 793 aaKnown RBP18.23■□□□□ 0.51
XRCC3-215ENST00000555964 FSTL4Q6MZW2 842 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 BRSK2Q8IWQ3 736 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 LRRC52Q8N7C0 313 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 FSIP1Q8NA03 581 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 TRMT2BQ96GJ1 504 aaKnown RBP18.23■□□□□ 0.51
XRCC3-215ENST00000555964 TMEM206Q9H813 350 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 ITGA11Q9UKX5 1188 aa18.23■□□□□ 0.51
XRCC3-215ENST00000555964 MAGED2Q9UNF1 606 aaPredicted RBP18.23■□□□□ 0.51
XRCC3-215ENST00000555964 HELZP42694 1942 aaKnown RBP18.22■□□□□ 0.51
XRCC3-215ENST00000555964 TISP43B9A030 160 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 PPP1R37O75864 691 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 ZNF806P0C7X5 589 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 PCSK1P29120 753 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 POLR2BP30876 1174 aaKnown RBP18.22■□□□□ 0.51
XRCC3-215ENST00000555964 FAM160A1Q05DH4 1040 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 INTS6LQ5JSJ4 861 aaKnown RBP18.22■□□□□ 0.51
XRCC3-215ENST00000555964 L1TD1Q5T7N2 865 aaKnown RBP18.22■□□□□ 0.51
XRCC3-215ENST00000555964 TXNDC8Q6A555 127 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 CRELD2Q6UXH1 353 aaPredicted RBP18.22■□□□□ 0.51
XRCC3-215ENST00000555964 TMEM150AQ86TG1 271 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 PDCL2Q8N4E4 241 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 ATP2A3Q93084 1043 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 ACDQ96AP0 544 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 FUBP3Q96I24 572 aaKnown RBP eCLIP18.22■□□□□ 0.51
XRCC3-215ENST00000555964 P2RY13Q9BPV8 354 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 PI4K2AQ9BTU6 479 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 ARRDC1-AS1Q9H2J1 176 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 C2orf42Q9NWW7 574 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 DDX43Q9NXZ2 648 aaKnown RBP18.22■□□□□ 0.51
XRCC3-215ENST00000555964 CCL26Q9Y258 94 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 PCDHB13Q9Y5F0 798 aa18.22■□□□□ 0.51
XRCC3-215ENST00000555964 MYO16Q9Y6X6 1858 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 TRAV19A0A0A6YYK7 116 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 TULP1O00294 542 aaPredicted RBP18.21■□□□□ 0.51
XRCC3-215ENST00000555964 AXIN1O15169 862 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 RNF40O75150 1001 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 NOL4O94818 638 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 USP17L7P0C7H9 530 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 GARTP22102 1010 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 KCNA4P22459 653 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 ADSSP30520 456 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 RAP1GAPP47736 663 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 IFNAR2P48551 515 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 LHX1P48742 406 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 NR1H3Q13133 447 aa18.21■□□□□ 0.51
XRCC3-215ENST00000555964 MTF1Q14872 753 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms