RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 ABCB6Q9NP58 842 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 AGPAT3Q9NRZ7 376 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 UXTQ9UBK9 157 aaPredicted RBP16.56■□□□□ 0.24
SNX6-205ENST00000555648 PDCD11Q14690 1871 aaKnown RBP16.55■□□□□ 0.24
SNX6-205ENST00000555648 PVALEFA0A1B0GWK0 134 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 SLC38A8A6NNN8 435 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 CLIC2O15247 247 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 DDX6P26196 483 aaKnown RBP eCLIP16.55■□□□□ 0.24
SNX6-205ENST00000555648 DNM1Q05193 864 aaKnown RBP16.55■□□□□ 0.24
SNX6-205ENST00000555648 FCHO2Q0JRZ9 810 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 LRRC32Q14392 662 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 SNRNP35Q16560 246 aaKnown RBP16.55■□□□□ 0.24
SNX6-205ENST00000555648 RESP18Q5W5W9 173 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 C4orf50Q6ZRC1 276 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 DPH6Q7L8W6 267 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 CELF5Q8N6W0 485 aaKnown RBP16.55■□□□□ 0.24
SNX6-205ENST00000555648 XXYLT1Q8NBI6 393 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 OR5B17Q8NGF7 314 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 LEO1Q8WVC0 666 aaPredicted RBP16.55■□□□□ 0.24
SNX6-205ENST00000555648 CCDC127Q96BQ5 260 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 FAM84AQ96KN4 292 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 IER2Q9BTL4 223 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 TMLHEQ9NVH6 421 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 CGNQ9P2M7 1197 aaKnown RBP16.55■□□□□ 0.24
SNX6-205ENST00000555648 SIX4Q9UIU6 781 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 GTF3C4Q9UKN8 822 aa16.55■□□□□ 0.24
SNX6-205ENST00000555648 NOTCH4Q99466 2003 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 CYP2F1P24903 491 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 MLLT6P55198 1093 aaPredicted RBP16.54■□□□□ 0.24
SNX6-205ENST00000555648 TRPC3Q13507 836 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 MAPRE1Q15691 268 aaKnown RBP16.54■□□□□ 0.24
SNX6-205ENST00000555648 CC2D1AQ6P1N0 951 aaPredicted RBP16.54■□□□□ 0.24
SNX6-205ENST00000555648 EPM2AIP1Q7L775 607 aaPredicted RBP16.54■□□□□ 0.24
SNX6-205ENST00000555648 SCN4BQ8IWT1 228 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 CMTM8Q8IZV2 173 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 MAB21L3Q8N8X9 362 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 TTC8Q8TAM2 541 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 GOLGA5Q8TBA6 731 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 RSPRY1Q96DX4 576 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 SNX25Q9H3E2 840 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 IL21Q9HBE4 155 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 SLC39A2Q9NP94 309 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 PCDHGA2Q9Y5H1 932 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 MYH15Q9Y2K3 1946 aa16.54■□□□□ 0.24
SNX6-205ENST00000555648 TGFB1I1O43294 461 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 EXOC3O60645 756 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 PHACTR2O75167 634 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 CASP1P29466 404 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 WEE1P30291 646 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 GPR15P49685 360 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 CCR3P51677 355 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 NRLP54845 237 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 NLRP12P59046 1061 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 TNNC1P63316 161 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 MTAPQ13126 283 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 DDR2Q16832 855 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 KNOP1Q1ED39 458 aaKnown RBP16.53■□□□□ 0.24
SNX6-205ENST00000555648 SOWAHAQ2M3V2 549 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 SDHAF4Q5VUM1 108 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 TRAPPC11Q7Z392 1133 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 RALGPS2Q86X27 583 aaPredicted RBP16.53■□□□□ 0.24
SNX6-205ENST00000555648 MAML2Q8IZL2 1156 aaPredicted RBP16.53■□□□□ 0.24
SNX6-205ENST00000555648 FSIP1Q8NA03 581 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 SCFD1Q8WVM8 642 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 SECISBP2LQ93073 1101 aaKnown RBP16.53■□□□□ 0.24
SNX6-205ENST00000555648 FUBP3Q96I24 572 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNX6-205ENST00000555648 ZFYVE19Q96K21 471 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 CGRRF1Q99675 332 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 SYT15Q9BQS2 421 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 MKNK1Q9BUB5 465 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 SLC46A2Q9BY10 475 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 CHRDQ9H2X0 955 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 EXOC1Q9NV70 894 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 ZSCAN32Q9NX65 697 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 MAGEC2Q9UBF1 373 aaPredicted RBP16.53■□□□□ 0.24
SNX6-205ENST00000555648 RCOR1Q9UKL0 485 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 CDH9Q9ULB4 789 aa16.53■□□□□ 0.24
SNX6-205ENST00000555648 SPECC1L-ADORA2AF8WAN1 911 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 GABRDO14764 452 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 PRAMEF12O95522 483 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 SLFN14P0C7P3 912 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 ANXA13P27216 316 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 HOXD13P35453 343 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 KRT85P78386 507 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 CYP24A1Q07973 514 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 CUL4BQ13620 913 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 PKP1Q13835 747 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 PSMD6Q15008 389 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 CFAP221Q4G0U5 840 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 OSTM1Q86WC4 334 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 CXorf38Q8TB03 319 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 RUBCNQ92622 972 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 CCDC47Q96A33 483 aaKnown RBP16.52■□□□□ 0.24
SNX6-205ENST00000555648 FAM126AQ9BYI3 521 aaPredicted RBP16.52■□□□□ 0.24
SNX6-205ENST00000555648 SMG9Q9H0W8 520 aaKnown RBP16.52■□□□□ 0.24
SNX6-205ENST00000555648 KIF9Q9HAQ2 790 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 TRPC7Q9HCX4 862 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 GTSE1Q9NYZ3 720 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 SERTAD1Q9UHV2 236 aa16.52■□□□□ 0.24
SNX6-205ENST00000555648 ZFHX2Q9C0A1 2572 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms