RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 LMO2P25791 158 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 CASQ1P31415 396 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 LHX1P48742 406 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 AARSP49588 968 aaKnown RBP eCLIP10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 WDR5P61964 334 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 NOMO3P69849 1222 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 GPC5P78333 572 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 DEFB103AP81534 67 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 FPGSQ05932 587 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 STILQ15468 1287 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 CNGA2Q16280 664 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 IFI16Q16666 785 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 GOLGA7BQ2TAP0 167 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 SPOUT1Q5T280 376 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 LIN9Q5TKA1 542 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 CD300LGQ6UXG3 332 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 LIMS2Q7Z4I7 341 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 CRIPAKQ8N1N5 446 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 LRRC43Q8N309 656 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 C1orf131Q8NDD1 294 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 TOP1MTQ969P6 601 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 ZNF653Q96CK0 615 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 TRIM11Q96F44 468 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 TNIP3Q96KP6 325 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 SUSD3Q96L08 255 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 NOX5Q96PH1 765 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 LPIN3Q9BQK8 851 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 TMEM175Q9BSA9 504 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 HTATIP2Q9BUP3 242 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 THAP2Q9H0W7 228 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 FAM49BQ9NUQ9 324 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 DDX43Q9NXZ2 648 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 MYO1AQ9UBC5 1043 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 HESX1Q9UBX0 185 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 DSEQ9UL01 958 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 STXBP5LQ9Y2K9 1186 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 FAN1Q9Y2M0 1017 aa10.25□□□□□ -0.77
HNRNPC-220ENST00000555585 TSC2P49815 1807 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 A0A0A6YYK5 440 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 BTNL10A8MVZ5 291 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 TMEM189-UBE2V1I3L0A0 370 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 M0QZQ0 153 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 O00370 1275 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 GABRDO14764 452 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 TRAPPC3O43617 180 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 DGKIO75912 1065 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 LSM8O95777 96 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 ITGB1P05556 798 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 SYN1P17600 705 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 PTPN1P18031 435 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 ACAT1P24752 427 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 ADORA2BP29275 332 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 SLC11A1P49279 550 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 EMP3P54852 163 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 PSMC1P62191 440 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 CENPCQ03188 943 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 PPP1R26Q5T8A7 1209 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 OTOP2Q7RTS6 562 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 ERICH1Q86X53 443 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 MCOLN2Q8IZK6 566 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 CRYBG2Q8N1P7 616 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 THEM5Q8N1Q8 247 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 RNF10Q8N5U6 811 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 C12orf29Q8N999 325 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 MSANTD4Q8NCY6 345 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 KIF18AQ8NI77 898 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 UBA3Q8TBC4 463 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 RFFLQ8WZ73 363 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 ARHGEF26Q96DR7 871 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 ALS2CR12Q96Q35 445 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 SYT15Q9BQS2 421 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 C11orf70Q9BRQ4 267 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 MED10Q9BTT4 135 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 ZNF518BQ9C0D4 1074 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 LHX5Q9H2C1 402 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 ADAM22Q9P0K1 906 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 CTTNBP2NLQ9P2B4 639 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 HCSTQ9UBK5 93 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 CNOT8Q9UFF9 292 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 SALL4Q9UJQ4 1053 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 TSPAN16Q9UKR8 245 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 NCANO14594 1321 aa10.24□□□□□ -0.77
HNRNPC-220ENST00000555585 BRCA2P51587 3418 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 NT5C1B-RDH14C9J2C7 533 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 ATP2C2O75185 946 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 CYP11A1P05108 521 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 MYBL1P10243 752 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 CCDC130P13994 396 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 TYMPP19971 482 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 PCSK1P29120 753 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 CDH5P33151 784 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 BCAR1P56945 870 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 MDH1BQ5I0G3 518 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 ARHGAP17Q68EM7 881 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 OVOS1Q6IE37 1185 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 LCLAT1Q6UWP7 414 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 MMS22LQ6ZRQ5 1243 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 ZNF365Q70YC5 407 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 MON1BQ7L1V2 547 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms