RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ENPP3O14638 875 aa4.22□□□□□ -1.73
SRP54-207ENST00000555535 CDKN2AP42771 156 aaKnown RBP4.22□□□□□ -1.73
SRP54-207ENST00000555535 GPR3P46089 330 aa4.22□□□□□ -1.73
SRP54-207ENST00000555535 SRSF1Q07955 248 aaKnown RBP eCLIP4.22□□□□□ -1.73
SRP54-207ENST00000555535 ZNF813Q6ZN06 617 aa4.22□□□□□ -1.73
SRP54-207ENST00000555535 OR2I1PQ8NGU4 316 aa4.22□□□□□ -1.73
SRP54-207ENST00000555535 RITA1Q96K30 269 aa4.22□□□□□ -1.73
SRP54-207ENST00000555535 KLHL13Q9P2N7 655 aa4.22□□□□□ -1.73
SRP54-207ENST00000555535 PI4KBQ9UBF8 816 aa4.22□□□□□ -1.73
SRP54-207ENST00000555535 APOBEC2Q9Y235 224 aaKnown RBP4.22□□□□□ -1.73
SRP54-207ENST00000555535 POLRMTO00411 1230 aaKnown RBP4.21□□□□□ -1.74
SRP54-207ENST00000555535 FCHO1O14526 889 aa4.21□□□□□ -1.74
SRP54-207ENST00000555535 TLR5O60602 858 aa4.21□□□□□ -1.74
SRP54-207ENST00000555535 GAS8-AS1O95177 125 aa4.21□□□□□ -1.74
SRP54-207ENST00000555535 NPSP0C0P6 89 aa4.21□□□□□ -1.74
SRP54-207ENST00000555535 ITGALP20701 1170 aa4.21□□□□□ -1.74
SRP54-207ENST00000555535 C9orf50Q5SZB4 431 aa4.21□□□□□ -1.74
SRP54-207ENST00000555535 MEX3CQ5U5Q3 659 aaKnown RBP4.21□□□□□ -1.74
SRP54-207ENST00000555535 SLC17A8Q8NDX2 589 aa4.21□□□□□ -1.74
SRP54-207ENST00000555535 CYP2W1Q8TAV3 490 aa4.21□□□□□ -1.74
SRP54-207ENST00000555535 PCDHGA2Q9Y5H1 932 aa4.21□□□□□ -1.74
SRP54-207ENST00000555535 TOMM40O96008 361 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 CD6P30203 668 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 CYP4F2P78329 520 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 GHRHRQ02643 423 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 ZNF268Q14587 947 aaPredicted RBP4.2□□□□□ -1.74
SRP54-207ENST00000555535 RBM20Q5T481 1227 aaKnown RBP4.2□□□□□ -1.74
SRP54-207ENST00000555535 GFI1BQ5VTD9 330 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 DAB2IPQ5VWQ8 1189 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 NAPRTQ6XQN6 538 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 LHFPL2Q6ZUX7 228 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 DTX2Q86UW9 622 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 DCBLD1Q8N8Z6 715 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 TMIEQ8NEW7 156 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 TMEM255BQ8WV15 326 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 DUSP22Q9NRW4 184 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 C14orf119Q9NWQ9 140 aa4.2□□□□□ -1.74
SRP54-207ENST00000555535 FNDC1Q4ZHG4 1894 aaPredicted RBP4.2□□□□□ -1.74
SRP54-207ENST00000555535 C4orf47A7E2U8 309 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 SLC16A3O15427 465 aaKnown RBP4.19□□□□□ -1.74
SRP54-207ENST00000555535 CYP2A6P11509 494 aaPredicted RBP4.19□□□□□ -1.74
SRP54-207ENST00000555535 OSMP13725 252 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 MTNR1BP49286 362 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 STAT4Q14765 748 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 FBXL22Q6P050 247 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 MAVSQ7Z434 540 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 FAM109AQ8N4B1 249 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 FSD1LQ9BXM9 530 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 DNAJC28Q9NX36 388 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 ADAMTS5Q9UNA0 930 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 TBX22Q9Y458 520 aa4.19□□□□□ -1.74
SRP54-207ENST00000555535 TCF20Q9UGU0 1960 aaKnown RBP4.18□□□□□ -1.74
SRP54-207ENST00000555535 ZMYM2Q9UBW7 1377 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 LACTBL1A8MY62 500 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 B4DGG1 531 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 FZD9O00144 591 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 EYA4O95677 639 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 PSG1P11464 419 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 ME1P48163 572 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 RSPH3Q86UC2 560 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 PDSS2Q86YH6 399 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 AFAP1L2Q8N4X5 818 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 RP9Q8TA86 221 aaKnown RBP4.18□□□□□ -1.74
SRP54-207ENST00000555535 DPF2Q92785 391 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 SCAMP4Q969E2 229 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 PUS7Q96PZ0 661 aaKnown RBP4.18□□□□□ -1.74
SRP54-207ENST00000555535 SLC2A13Q96QE2 648 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 FAM234AQ9H0X4 552 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 CCM2LQ9NUG4 571 aaPredicted RBP4.18□□□□□ -1.74
SRP54-207ENST00000555535 TRMT13Q9NUP7 481 aaKnown RBP4.18□□□□□ -1.74
SRP54-207ENST00000555535 DNM3Q9UQ16 869 aa4.18□□□□□ -1.74
SRP54-207ENST00000555535 TTC3P53804 2025 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 BRINP1O60477 761 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 TULP3O75386 442 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 PRKD3O94806 890 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 CHEK2O96017 543 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 SBK3P0C264 359 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 HILS1P60008 231 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 TBC1D25Q3MII6 688 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 MTHFD1LQ6UB35 978 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 PARS2Q7L3T8 475 aaKnown RBP4.17□□□□□ -1.74
SRP54-207ENST00000555535 RHOT1Q8IXI2 618 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 FBXO41Q8TF61 875 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 CAAP1Q9H8G2 361 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 SELENONQ9NZV5 590 aa4.17□□□□□ -1.74
SRP54-207ENST00000555535 ADAM10O14672 748 aa4.16□□□□□ -1.74
SRP54-207ENST00000555535 ENGP17813 658 aa4.16□□□□□ -1.74
SRP54-207ENST00000555535 TMPRSS15P98073 1019 aa4.16□□□□□ -1.74
SRP54-207ENST00000555535 SFRP4Q6FHJ7 346 aaPredicted RBP4.16□□□□□ -1.74
SRP54-207ENST00000555535 SLC30A10Q6XR72 485 aa4.16□□□□□ -1.74
SRP54-207ENST00000555535 DEF8Q6ZN54 512 aa4.16□□□□□ -1.74
SRP54-207ENST00000555535 AHCYL2Q96HN2 611 aaKnown RBP4.16□□□□□ -1.74
SRP54-207ENST00000555535 SIK2Q9H0K1 926 aa4.16□□□□□ -1.74
SRP54-207ENST00000555535 TDP1Q9NUW8 608 aa4.16□□□□□ -1.74
SRP54-207ENST00000555535 MCM8Q9UJA3 840 aa4.16□□□□□ -1.74
SRP54-207ENST00000555535 IL6RP08887 468 aaPredicted RBP4.15□□□□□ -1.75
SRP54-207ENST00000555535 LPOP22079 712 aaPredicted RBP4.15□□□□□ -1.75
SRP54-207ENST00000555535 MASP1P48740 699 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 ERVK-21P61565 698 aa4.15□□□□□ -1.75
SRP54-207ENST00000555535 FLYWCH1Q4VC44 716 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms