RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 FAM163BP0C2L3 166 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 LAMP2P13473 410 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 CD44P16070 742 aaKnown RBP12.93□□□□□ -0.34
SRP54-206ENST00000555317 PMS1P54277 932 aaKnown RBP12.93□□□□□ -0.34
SRP54-206ENST00000555317 PSMC1P62191 440 aaKnown RBP12.93□□□□□ -0.34
SRP54-206ENST00000555317 RPL10AP62906 217 aaKnown RBP12.93□□□□□ -0.34
SRP54-206ENST00000555317 ZXDAP98168 799 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 CYP27A1Q02318 531 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 TMEM31Q5JXX7 168 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 LIMS2Q7Z4I7 341 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 LRRTM3Q86VH5 581 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 TTC9BQ8N6N2 239 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 ITFG1Q8TB96 612 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 EDAQ92838 391 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 FGF13Q92913 245 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 NXPE3Q969Y0 559 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
SRP54-206ENST00000555317 XYLT2Q9H1B5 865 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 CRISPLD1Q9H336 500 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 SMYD3Q9H7B4 428 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 METTL14Q9HCE5 456 aaKnown RBP12.93□□□□□ -0.34
SRP54-206ENST00000555317 GDE1Q9NZC3 331 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 CEP72Q9P209 647 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 MAGEC2Q9UBF1 373 aaPredicted RBP12.93□□□□□ -0.34
SRP54-206ENST00000555317 GTF3C4Q9UKN8 822 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 ATP8B3O60423 1300 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 ZDBF2Q9HCK1 2354 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 FAM86C2PA6NEL3 165 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 PPP1R3GB7ZBB8 358 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 ASS1P00966 412 aaKnown RBP12.92□□□□□ -0.34
SRP54-206ENST00000555317 HAPLN1P10915 354 aaPredicted RBP12.92□□□□□ -0.34
SRP54-206ENST00000555317 CEBPBP17676 345 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 LMO2P25791 158 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 ANXA13P27216 316 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 STX17P56962 302 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 NOP14P78316 857 aaKnown RBP12.92□□□□□ -0.34
SRP54-206ENST00000555317 PPP3CAQ08209 521 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 TDGQ13569 410 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 SLC5A9Q2M3M2 681 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 ARHGAP15Q53QZ3 475 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 MDH1BQ5I0G3 518 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 WDR44Q5JSH3 913 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 C1orf220Q5T0J3 134 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 FRMD5Q7Z6J6 570 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 SCN4BQ8IWT1 228 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 NPAS3Q8IXF0 933 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 ZC3H3Q8IXZ2 948 aaKnown RBP12.92□□□□□ -0.34
SRP54-206ENST00000555317 HS6ST3Q8IZP7 471 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 PSMG2Q969U7 264 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 FUBP3Q96I24 572 aaKnown RBP eCLIP12.92□□□□□ -0.34
SRP54-206ENST00000555317 TNIP3Q96KP6 325 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 LPIN3Q9BQK8 851 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 KCNK12Q9HB15 430 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.92□□□□□ -0.34
SRP54-206ENST00000555317 LMBRD1Q9NUN5 540 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 TMLHEQ9NVH6 421 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 DACH1Q9UI36 760 aa12.92□□□□□ -0.34
SRP54-206ENST00000555317 MYH10P35580 1976 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 MYBPHLA2RUH7 354 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 HCRTO43612 131 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 ATP2C2O75185 946 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 MICAL2O94851 1124 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 GNA14O95837 355 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 BMP6P22004 513 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 CYP2F1P24903 491 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 RAP1GAPP47736 663 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 SIGLEC14Q08ET2 396 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 CETN1Q12798 172 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 TPD52L1Q16890 204 aaPredicted RBP12.91□□□□□ -0.34
SRP54-206ENST00000555317 CFAP221Q4G0U5 840 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 TTI2Q6NXR4 508 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 FOXR2Q6PJQ5 311 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 DNAJB7Q7Z6W7 309 aaPredicted RBP12.91□□□□□ -0.34
SRP54-206ENST00000555317 FILIP1Q7Z7B0 1213 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 B3GALNT2Q8NCR0 500 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 FBXL13Q8NEE6 735 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 MYCBPAPQ8TBZ2 947 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 TAS1R2Q8TE23 839 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 GIPC2Q8TF65 315 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 MYLPFQ96A32 169 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 TCEAL4Q96EI5 215 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 MCRS1Q96EZ8 462 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 NIF3L1Q9GZT8 377 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 FBXL21Q9UKT6 434 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 TECTAO75443 2155 aa12.91□□□□□ -0.34
SRP54-206ENST00000555317 A0A1W2PRU2 124 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 TRIM66O15016 1216 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 GPR37L1O60883 481 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 MBD3O95983 291 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 CSH1P0DML2 217 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 CSH2P0DML3 217 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 CCDC192P0DO97 292 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 PTPN1P18031 435 aaKnown RBP12.9□□□□□ -0.34
SRP54-206ENST00000555317 ATF6P18850 670 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 CDC25CP30307 473 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 GRIK1P39086 918 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 MAGEA11P43364 429 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 EPHA5P54756 1037 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 CDH8P55286 799 aa12.9□□□□□ -0.34
SRP54-206ENST00000555317 HTR4Q13639 388 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms