RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 NLRP12P59046 1061 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 DMP1Q13316 513 aaPredicted RBP10.46□□□□□ -0.74
SCFD1-215ENST00000555259 ZNF268Q14587 947 aaPredicted RBP10.46□□□□□ -0.74
SCFD1-215ENST00000555259 MTF1Q14872 753 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 NOLC1Q14978 699 aaKnown RBP eCLIP10.46□□□□□ -0.74
SCFD1-215ENST00000555259 ZBTB6Q15916 424 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 CRY1Q16526 586 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 C2orf27AQ580R0 203 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 PEAR1Q5VY43 1037 aaPredicted RBP10.46□□□□□ -0.74
SCFD1-215ENST00000555259 GLIS3Q8NEA6 775 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 ERMNQ8TAM6 284 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 OSCP1Q8WVF1 389 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 LRIG1Q96JA1 1093 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 SPACA7Q96KW9 195 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 GTPBP2Q9BX10 602 aaKnown RBP10.46□□□□□ -0.74
SCFD1-215ENST00000555259 DUS2Q9NX74 493 aaKnown RBP10.46□□□□□ -0.74
SCFD1-215ENST00000555259 PILRBQ9UKJ0 227 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 MMP17Q9ULZ9 603 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 CYP46A1Q9Y6A2 500 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 PTPRDP23468 1912 aa10.46□□□□□ -0.74
SCFD1-215ENST00000555259 ZNF638Q14966 1978 aaKnown RBP10.45□□□□□ -0.74
SCFD1-215ENST00000555259 ANTXRLA6NF34 631 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 K7EQS6 105 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 MAP3K13O43283 966 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 OPHN1O60890 802 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 TOM1L1O75674 476 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 CFIP05156 583 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 ODC1P11926 461 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 HNRNPLP14866 589 aaKnown RBP eCLIP10.45□□□□□ -0.743e-7■■□□□ 12.7
SCFD1-215ENST00000555259 HMGA1P17096 107 aaKnown RBP10.45□□□□□ -0.74
SCFD1-215ENST00000555259 CYP3A5P20815 502 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 HOXD12P35452 270 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 DPP6P42658 865 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 GUCY2FP51841 1108 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 SEC13P55735 322 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 HNRNPDQ14103 355 aaKnown RBP10.45□□□□□ -0.74
SCFD1-215ENST00000555259 ECM1Q16610 540 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 SPDYCQ5MJ68 293 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 LYSMD4Q5XG99 296 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 CCNI2Q6ZMN8 369 aaPredicted RBP10.45□□□□□ -0.74
SCFD1-215ENST00000555259 MON1AQ86VX9 555 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 TTC30AQ86WT1 665 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 DAW1Q8N136 415 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 CCDC33Q8N5R6 958 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 FRMD1Q8N878 549 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 MDM1Q8TC05 714 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 ADAMTS14Q8WXS8 1223 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 ATP2A3Q93084 1043 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 ZCWPW1Q9H0M4 648 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 PLEKHA5Q9HAU0 1116 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 SCUBE2Q9NQ36 999 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 KMT5AQ9NQR1 393 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 CACNA2D2Q9NY47 1150 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
SCFD1-215ENST00000555259 UBQLN1Q9UMX0 589 aaKnown RBP10.45□□□□□ -0.74
SCFD1-215ENST00000555259 SLC6A14Q9UN76 642 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 RAXQ9Y2V3 346 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.45□□□□□ -0.74
SCFD1-215ENST00000555259 WNT6Q9Y6F9 365 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 DENND4CQ5VZ89 1909 aa10.45□□□□□ -0.74
SCFD1-215ENST00000555259 TTC26A0AVF1 554 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 BTBD18B2RXH4 712 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 HAX1O00165 279 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 PPEF2O14830 753 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 ALDH1A2O94788 518 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 HAPLN1P10915 354 aaPredicted RBP10.44□□□□□ -0.74
SCFD1-215ENST00000555259 CD59P13987 128 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 MUTP22033 750 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 ITPKAP23677 461 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 MCM7P33993 719 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 IFNAR2P48551 515 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 LILRA4P59901 499 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 FAM160A1Q05DH4 1040 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 ZNF77Q15935 545 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 EML3Q32P44 896 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 LMBRD2Q68DH5 695 aaPredicted RBP10.44□□□□□ -0.74
SCFD1-215ENST00000555259 TMEM92Q6UXU6 159 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 MINDY1Q8N5J2 469 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 TTC16Q8NEE8 873 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 WHAMMQ8TF30 809 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 MRPS31Q92665 395 aaKnown RBP10.44□□□□□ -0.74
SCFD1-215ENST00000555259 SENP8Q96LD8 212 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
SCFD1-215ENST00000555259 RBM19Q9Y4C8 960 aaKnown RBP10.44□□□□□ -0.74
SCFD1-215ENST00000555259 URB1O60287 2271 aaKnown RBP10.44□□□□□ -0.74
SCFD1-215ENST00000555259 NAV2Q8IVL1 2488 aa10.44□□□□□ -0.74
SCFD1-215ENST00000555259 SLC16A4O15374 487 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 HIP1RO75146 1068 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 CTDNEP1O95476 244 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 CYP11A1P05108 521 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 GFPT1Q06210 699 aaPredicted RBP10.43□□□□□ -0.74
SCFD1-215ENST00000555259 MCL1Q07820 350 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 TRIP6Q15654 476 aaKnown RBP10.43□□□□□ -0.74
SCFD1-215ENST00000555259 DUOXA1Q1HG43 343 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 HAUS3Q68CZ6 603 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 LRRTM3Q86VH5 581 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 EFCAB13Q8IY85 973 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 PNPLA1Q8N8W4 532 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 OR2I1PQ8NGU4 316 aa10.43□□□□□ -0.74
SCFD1-215ENST00000555259 CEP76Q8TAP6 659 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms