RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 LRG1P02750 347 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 POU2F2P09086 479 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 TRIM49P0CI25 452 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 TRIM49CP0CI26 452 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 ALDH1A3P47895 512 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 YWHAEP62258 255 aaKnown RBP11.33□□□□□ -0.6
TMEM260-206ENST00000555046 ROR1Q01973 937 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 ADCY1Q08828 1119 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 ACAP1Q15027 740 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 C1orf220Q5T0J3 134 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 IQCEQ6IPM2 695 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 SYCE2Q6PIF2 218 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 C4orf50Q6ZRC1 276 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 GPR149Q86SP6 731 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 UNC93AQ86WB7 457 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 SPPL2BQ8TCT7 592 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 ATOH1Q92858 354 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-206ENST00000555046 SLC35C1Q96A29 364 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 FAM81BQ96LP2 452 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 PRKD2Q9BZL6 878 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 ZCWPW1Q9H0M4 648 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 XYLT2Q9H1B5 865 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 MMRN2Q9H8L6 949 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 CYP4F11Q9HBI6 524 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 FBXW11Q9UKB1 542 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 L1RE1Q9UN81 338 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 COQ4Q9Y3A0 265 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 A8MXQ7 604 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 ADAM12O43184 909 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 MBTPS2O43462 519 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 TBX10O75333 385 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 PAPLNO95428 1278 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 VNN1O95497 513 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 AFPP02771 609 aaKnown RBP11.32□□□□□ -0.6
TMEM260-206ENST00000555046 C8AP07357 584 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 SPATA31D3P0C874 917 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 TBXAS1P24557 533 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-206ENST00000555046 MTIF2P46199 727 aaKnown RBP11.32□□□□□ -0.6
TMEM260-206ENST00000555046 FMO5P49326 533 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 EPHB3P54753 998 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 DLX2Q07687 328 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-206ENST00000555046 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 CBX2Q14781 532 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-206ENST00000555046 SMAD2Q15796 467 aaKnown RBP11.32□□□□□ -0.6
TMEM260-206ENST00000555046 SLC39A12Q504Y0 691 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 RARS2Q5T160 578 aaKnown RBP11.32□□□□□ -0.6
TMEM260-206ENST00000555046 SMYD5Q6GMV2 418 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 RSPO2Q6UXX9 243 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-206ENST00000555046 TMC5Q6UXY8 1006 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 SPATA31D4Q6ZUB0 917 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 BMP8AQ7Z5Y6 402 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 TRIM59Q8IWR1 403 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 LEMD2Q8NC56 503 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 TAS1R2Q8TE23 839 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 ZNF512Q96ME7 567 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-206ENST00000555046 ABCB6Q9NP58 842 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 TMEM63CQ9P1W3 806 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 ASB3Q9Y575 518 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 PCDHB5Q9Y5E4 795 aa11.32□□□□□ -0.6
TMEM260-206ENST00000555046 WDR27A2RRH5 827 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 ZNF197O14709 1029 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 FGF19O95750 216 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 PDGFRBP09619 1106 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 PTPN2P17706 415 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 CDK11BP21127 795 aaKnown RBP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 EEF1GP26641 437 aaKnown RBP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 RPL10AP62906 217 aaKnown RBP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 NOP14P78316 857 aaKnown RBP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 TYRO3Q06418 890 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 VEPH1Q14D04 833 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 CLUL1Q15846 466 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 TAF12Q16514 161 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 INTS6LQ5JSJ4 861 aaKnown RBP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 RNF19BQ6ZMZ0 732 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 SPATA2LQ8IUW3 424 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 TMEM130Q8N3G9 435 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 SLC7A14Q8TBB6 771 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 SUSD6Q92537 303 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 SMG7Q92540 1137 aaKnown RBP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 FUBP3Q96I24 572 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 CNOT6LQ96LI5 555 aaKnown RBP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 CEP295NLQ96MC4 621 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 PHF7Q9BWX1 381 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 NIF3L1Q9GZT8 377 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 EHD2Q9NZN4 543 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 MUTYHQ9UIF7 546 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 NR2E1Q9Y466 385 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 NFE2L3Q9Y4A8 694 aa11.31□□□□□ -0.6
TMEM260-206ENST00000555046 USP15Q9Y4E8 981 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-206ENST00000555046 GTPBP10A4D1E9 387 aaKnown RBP11.3□□□□□ -0.6
TMEM260-206ENST00000555046 BECN2A8MW95 431 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 PTPN1P18031 435 aaKnown RBP11.3□□□□□ -0.6
TMEM260-206ENST00000555046 TPM4P67936 248 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 RBM10P98175 930 aaKnown RBP11.3□□□□□ -0.6
TMEM260-206ENST00000555046 MYL5Q02045 173 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 DUSP4Q13115 394 aa11.3□□□□□ -0.6
TMEM260-206ENST00000555046 MAN2A1Q16706 1144 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms