RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 SIX5Q8N196 739 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 PIK3R5Q8WYR1 880 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 SLC35C1Q96A29 364 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 LXNQ9BS40 222 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 TIPINQ9BVW5 301 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 HCSTQ9UBK5 93 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 DBR1Q9UK59 544 aaKnown RBP11.84□□□□□ -0.51
SRP54-205ENST00000554803 PADI3Q9ULW8 664 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 PLAAQ9Y263 795 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 USP20Q9Y2K6 914 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 NOC2LQ9Y3T9 749 aaKnown RBP11.84□□□□□ -0.51
SRP54-205ENST00000554803 SAMM50Q9Y512 469 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 PCDHB13Q9Y5F0 798 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 ANKRD62A6NC57 917 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 C5orf60A6NFR6 353 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 CCDC169A6NNP5 214 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 TBKBP1A7MCY6 615 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 PODXLO00592 558 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 ZBTB39O15060 712 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 CEP104O60308 925 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 ATG7O95352 703 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 WEE2P0C1S8 567 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 SP9P0CG40 484 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 GUCY2CP25092 1073 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 SFNP31947 248 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 CTNNA1P35221 906 aaKnown RBP11.83□□□□□ -0.52
SRP54-205ENST00000554803 ZNF131P52739 623 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 MCCD1P59942 119 aaPredicted RBP11.83□□□□□ -0.52
SRP54-205ENST00000554803 IFFO1Q0D2I5 559 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 BYSLQ13895 437 aaKnown RBP11.83□□□□□ -0.52
SRP54-205ENST00000554803 CEP85LQ5SZL2 805 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 NT5DC3Q86UY8 548 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 CCDC60Q8IWA6 550 aaPredicted RBP11.83□□□□□ -0.52
SRP54-205ENST00000554803 TPH2Q8IWU9 490 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 NELFCDQ8IXH7 590 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 C12orf56Q8IXR9 622 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 SLC30A5Q8TAD4 765 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 ZNF473Q8WTR7 871 aaKnown RBP11.83□□□□□ -0.52
SRP54-205ENST00000554803 SEPT1Q8WYJ6 367 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 MS4A14Q96JA4 679 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 CABS1Q96KC9 395 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 FAM81BQ96LP2 452 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 GDAP1L1Q96MZ0 367 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 PCYT2Q99447 389 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 REEP2Q9BRK0 252 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 TMEM109Q9BVC6 243 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 CWH43Q9H720 699 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 GCNT4Q9P109 453 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 GABBR1Q9UBS5 961 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 TCEAL9Q9UHQ7 104 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 RALYQ9UKM9 306 aaKnown RBP11.83□□□□□ -0.52
SRP54-205ENST00000554803 FRMD4BQ9Y2L6 1034 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 PCDHA10Q9Y5I2 948 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 ASPMQ8IZT6 3477 aa11.83□□□□□ -0.52
SRP54-205ENST00000554803 TMEM150BA6NC51 233 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 GMNCA6NCL1 334 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 PRR5-ARHGAP8B1AHC4 643 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 ZNF862O60290 1169 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 PPFIA2O75334 1257 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 MTA2O94776 668 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 FAM13AO94988 1023 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 P4HBP07237 508 aaKnown RBP11.82□□□□□ -0.52
SRP54-205ENST00000554803 LAG3P18627 525 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 CHRNA3P32297 505 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 HSD17B3P37058 310 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 SMTNP53814 917 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 PPP2R2AP63151 447 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 ARHGAP8P85298 464 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 PDCLQ13371 301 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 GRIK4Q16099 956 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 ATAT1Q5SQI0 421 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 MARCH8Q5T0T0 291 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 RARS2Q5T160 578 aaKnown RBP11.82□□□□□ -0.52
SRP54-205ENST00000554803 IER5Q5VY09 327 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 SWSAP1Q6NVH7 229 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 CEP128Q6ZU80 1094 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 TMC7Q7Z402 723 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 CCDC91Q7Z6B0 441 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 PACS2Q86VP3 889 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 SFR1Q86XK3 245 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 FAM186BQ8IYM0 893 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 UBL4BQ8N7F7 174 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 RDM1Q8NG50 284 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 MYCBPAPQ8TBZ2 947 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 MAGEC3Q8TD91 643 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 PIGOQ8TEQ8 1089 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
SRP54-205ENST00000554803 PGM2Q96G03 612 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 BORCS6Q96GS4 357 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 RPS6KC1Q96S38 1066 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 CCT8L2Q96SF2 557 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 PSMB7Q99436 277 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 RTKNQ9BST9 563 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 SMARCAD1Q9H4L7 1026 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 PARVGQ9HBI0 331 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 ERAP1Q9NZ08 941 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 MTRF1LQ9UGC7 380 aaKnown RBP11.82□□□□□ -0.52
SRP54-205ENST00000554803 SLC12A6Q9UHW9 1150 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 PCDHB7Q9Y5E2 793 aa11.82□□□□□ -0.52
SRP54-205ENST00000554803 TRPV2Q9Y5S1 764 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms