RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ASB16Q96NS5 453 aa11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 FNBP1Q96RU3 617 aa11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 CGRRF1Q99675 332 aa11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 KXD1Q9BQD3 176 aa11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 TBC1D17Q9HA65 648 aa11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 ZFP14Q9HCL3 533 aa11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 ABCB6Q9NP58 842 aa11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 DDX43Q9NXZ2 648 aaKnown RBP11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 CA14Q9ULX7 337 aa11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 SLC27A5Q9Y2P5 690 aa11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 SNX9Q9Y5X1 595 aa11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 KIF26AQ9ULI4 1882 aaPredicted RBP11.18□□□□□ -0.62
PTCD2P1-201ENST00000554393 F5P12259 2224 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 PATJQ8NI35 1801 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 PDXKO00764 312 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 CLIC2O15247 247 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 RHOBTB3O94955 611 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 STAU1O95793 577 aaKnown RBP11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 FAM163BP0C2L3 166 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 HAPLN1P10915 354 aaPredicted RBP11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 MYL4P12829 197 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 RFX1P22670 979 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 PCSK1P29120 753 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 WEE1P30291 646 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 STARD6P59095 220 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 NUCB2P80303 420 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 STK4Q13043 487 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 MGAT5BQ3V5L5 792 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 KMT5BQ4FZB7 885 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 INTS6LQ5JSJ4 861 aaKnown RBP11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 FAM78AQ5JUQ0 283 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 LMBRD2Q68DH5 695 aaPredicted RBP11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 TANGO2Q6ICL3 276 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 TRAPPC11Q7Z392 1133 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 DNAJB7Q7Z6W7 309 aaPredicted RBP11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 LRRTM3Q86VH5 581 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 CCDC105Q8IYK2 499 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 ADGRF2Q8IZF7 708 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 SHKBP1Q8TBC3 707 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 DEPDC1BQ8WUY9 529 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 CCDC47Q96A33 483 aaKnown RBP11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 E2F7Q96AV8 911 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 CCDC34Q96HJ3 373 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 CHAMP1Q96JM3 812 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 PKMYT1Q99640 499 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 SEPT5Q99719 369 aaPredicted RBP11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 DDX23Q9BUQ8 820 aaKnown RBP11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 KCTD10Q9H3F6 313 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 TRPV5Q9NQA5 729 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 DMAC2Q9NW81 257 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 ZMYM5Q9UJ78 669 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 PCDHB5Q9Y5E4 795 aa11.17□□□□□ -0.62
PTCD2P1-201ENST00000554393 ANAPC1Q9H1A4 1944 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 NRG2O14511 850 aaPredicted RBP11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 EXOC3O60645 756 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 KIF20AO95235 890 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 RPN1P04843 607 aaKnown RBP11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 DLATP10515 647 aaKnown RBP11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 ATF6P18850 670 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 TNNI1P19237 187 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 CDC25CP30307 473 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 AP3M2P53677 418 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 CLDN10P78369 228 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 TEAD2Q15562 447 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 MLF2Q15773 248 aaPredicted RBP11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 SOWAHAQ2M3V2 549 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 CFAP221Q4G0U5 840 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 KRBA2Q6ZNG9 492 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 GAREM2Q75VX8 874 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 FSIP1Q8NA03 581 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 RDH13Q8NBN7 331 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 PJA1Q8NG27 643 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 ZSCAN18Q8TBC5 510 aaPredicted RBP11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 CCDC127Q96BQ5 260 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 FUBP3Q96I24 572 aaKnown RBP eCLIP11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 FAM84AQ96KN4 292 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 GCNAQ96QF7 691 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 OSBPL6Q9BZF3 934 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 GZF1Q9H116 711 aaPredicted RBP11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 ABI2Q9NYB9 513 aaPredicted RBP11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 FANCMQ8IYD8 2048 aa11.16□□□□□ -0.62
PTCD2P1-201ENST00000554393 CFAP47Q6ZTR5 3102 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 A0A1W2PRU2 124 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 KANSL1LA0AUZ9 987 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 SOBPA7XYQ1 873 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 PI15O43692 258 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 TACC1O75410 805 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 SOAT2O75908 522 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 GJA1P17302 382 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 PSMC3P17980 439 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 WARSP23381 471 aaKnown RBP11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 GABRR2P28476 465 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 ATICP31939 592 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 RPL10AP62906 217 aaKnown RBP11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 DPYDQ12882 1025 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 KCNB1Q14721 858 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 MAPRE1Q15691 268 aaKnown RBP11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 NFIL3Q16649 462 aa11.15□□□□□ -0.62
PTCD2P1-201ENST00000554393 SLC44A4Q53GD3 710 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms