RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 SREBF1P36956 1147 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 NPEPPSP55786 919 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 DSC2Q02487 901 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 DDR1Q08345 913 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 PICALMQ13492 652 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 TTC22Q5TAA0 569 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 GET4Q7L5D6 327 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 TTC7BQ86TV6 843 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 DENND1CQ8IV53 801 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 DNAJC10Q8IXB1 793 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 C16orf71Q8IYS4 520 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 CMTM4Q8IZR5 234 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 LILRA3Q8N6C8 439 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 CCDC89Q8N998 374 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 PJA1Q8NG27 643 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 MDM1Q8TC05 714 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 CFHR4Q92496 578 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 RABGGTAQ92696 567 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 NEIL1Q96FI4 390 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 TMX3Q96JJ7 454 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 CLPTM1LQ96KA5 538 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 LRRC37BQ96QE4 947 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 GPHA2Q96T91 129 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 DPYSL5Q9BPU6 564 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 LANCL2Q9NS86 450 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 BABAM1Q9NWV8 329 aa5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 AJAP1Q9UKB5 411 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 SOS1Q07889 1333 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 USP42Q9H9J4 1324 aaKnown RBP5.97□□□□□ -1.45
MTHFD1-206ENST00000554353 CEMIPQ8WUJ3 1361 aa5.96□□□□□ -1.45
MTHFD1-206ENST00000554353 SIPA1L3O60292 1781 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 UBR2Q8IWV8 1755 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 A0A1W2PRX2 142 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 UBE2QL1A1L167 161 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 LRRC14BA6NHZ5 514 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 MATN2O00339 956 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 RNMTO43148 476 aaKnown RBP5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 CDC14BO60729 498 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 TOMM70O94826 608 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 SASH1O94885 1247 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 FTLP02792 175 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 ALDH2P05091 517 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 SERPINB3P29508 390 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 TM4SF1P30408 202 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 CHRNA5P30532 468 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 PPP2CBP62714 309 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 PPP2CAP67775 309 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 CDC42EP1Q00587 391 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 SLC39A6Q13433 755 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 RIN1Q13671 783 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 LLGL1Q15334 1064 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 PRAMEF14Q5SWL7 426 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 FAM83BQ5T0W9 1011 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 SMAP1Q8IYB5 467 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 SHCBP1Q8NEM2 672 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 FEZF2Q8TBJ5 459 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 OTUD7AQ8TE49 926 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 RGMAQ96B86 450 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 FAM193BQ96PV7 902 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 LMF1Q96S06 567 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 EPC1Q9H2F5 836 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 AS3MTQ9HBK9 375 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 IL23AQ9NPF7 189 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 KMT5AQ9NQR1 393 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 TMEM140Q9NV12 185 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 ZNF69Q9UC07 566 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 FAM50BQ9Y247 325 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 CACNA1SQ13698 1873 aa5.96□□□□□ -1.46
MTHFD1-206ENST00000554353 DLEC1Q9Y238 1755 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 KCPQ6ZWJ8 1503 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 POLRMTO00411 1230 aaKnown RBP5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 UBXN7O94888 489 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 AMY1AP04745 511 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 FAM163BP0C2L3 166 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 ZSCAN22P10073 491 aaPredicted RBP5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 CYP19A1P11511 503 aaPredicted RBP5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 CR2P20023 1033 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 CCT4P50991 539 aaKnown RBP5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 MAP2K6P52564 334 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 ADAM8P78325 824 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 TARDBPQ13148 414 aaKnown RBP eCLIP5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 GBX1Q14549 363 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 TAF7Q15545 349 aaPredicted RBP5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 THEMIS2Q5TEJ8 643 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 CCDC30Q5VVM6 783 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 GADL1Q6ZQY3 521 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 PDZD4Q76G19 769 aaPredicted RBP5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 ADGRE4PQ86SQ3 457 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 C1QL4Q86Z23 238 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 ZGPATQ8N5A5 531 aaKnown RBP5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 VPS37AQ8NEZ2 397 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 NSUN6Q8TEA1 469 aaKnown RBP5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 ARL8AQ96BM9 186 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 CYFIP2Q96F07 1278 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 STRBPQ96SI9 672 aaKnown RBP5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 CGRRF1Q99675 332 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 PTPN18Q99952 460 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 NRXN2Q9P2S2 1712 aa5.95□□□□□ -1.46
MTHFD1-206ENST00000554353 NARFQ9UHQ1 456 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms