RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 PI4K2AQ9BTU6 479 aa20.17■□□□□ 0.82
CPSF2-203ENST00000554290 FGFBP2Q9BYJ0 223 aa20.17■□□□□ 0.82
CPSF2-203ENST00000554290 ABCB6Q9NP58 842 aa20.17■□□□□ 0.82
CPSF2-203ENST00000554290 TMLHEQ9NVH6 421 aa20.17■□□□□ 0.82
CPSF2-203ENST00000554290 DDX43Q9NXZ2 648 aaKnown RBP20.17■□□□□ 0.82
CPSF2-203ENST00000554290 L1RE1Q9UN81 338 aa20.17■□□□□ 0.82
CPSF2-203ENST00000554290 SMG5Q9UPR3 1016 aaKnown RBP20.17■□□□□ 0.82
CPSF2-203ENST00000554290 TICRRQ7Z2Z1 1910 aa20.17■□□□□ 0.82
CPSF2-203ENST00000554290 ZNF233A6NK53 670 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 SOBPA7XYQ1 873 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 PPP6R2O75170 966 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 TDGF1P13385 188 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 DDX6P26196 483 aaKnown RBP eCLIP20.16■□□□□ 0.82
CPSF2-203ENST00000554290 CTHP32929 405 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 LHX1P48742 406 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 NLRP12P59046 1061 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 MYO1EQ12965 1108 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 SURF1Q15526 300 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 TOP6BLQ8N6T0 577 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 TTC8Q8TAM2 541 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 RMDN1Q96DB5 314 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 GTSE1Q9NYZ3 720 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 TFIP11Q9UBB9 837 aaKnown RBP20.16■□□□□ 0.82
CPSF2-203ENST00000554290 RAB23Q9ULC3 237 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 MAGED2Q9UNF1 606 aaPredicted RBP20.16■□□□□ 0.82
CPSF2-203ENST00000554290 SNX9Q9Y5X1 595 aa20.16■□□□□ 0.82
CPSF2-203ENST00000554290 TNNC2P02585 160 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 F11P03951 625 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 HMGA1P17096 107 aaKnown RBP20.15■□□□□ 0.82
CPSF2-203ENST00000554290 PCSK1P29120 753 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 PUM1Q14671 1186 aaKnown RBP eCLIP20.15■□□□□ 0.82
CPSF2-203ENST00000554290 ITPRIPL2Q3MIP1 535 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 INTS6LQ5JSJ4 861 aaKnown RBP20.15■□□□□ 0.82
CPSF2-203ENST00000554290 MAB21L3Q8N8X9 362 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 CXorf38Q8TB03 319 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 MRPS31Q92665 395 aaKnown RBP20.15■□□□□ 0.82
CPSF2-203ENST00000554290 TRIM9Q9C026 710 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 MTMR12Q9C0I1 747 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 KIAA1586Q9HCI6 787 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 GKN1Q9NS71 199 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 KBTBD4Q9NVX7 518 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 UXTQ9UBK9 157 aaPredicted RBP20.15■□□□□ 0.82
CPSF2-203ENST00000554290 F5P12259 2224 aa20.15■□□□□ 0.82
CPSF2-203ENST00000554290 CUTAO60888 179 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 ACAT1P24752 427 aaKnown RBP20.14■□□□□ 0.81
CPSF2-203ENST00000554290 DUOXA2Q1HG44 320 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 TXNDC11Q6PKC3 985 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 DPH6Q7L8W6 267 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 TMEM150AQ86TG1 271 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 SPATA2LQ8IUW3 424 aaPredicted RBP20.14■□□□□ 0.81
CPSF2-203ENST00000554290 ADGRF2Q8IZF7 708 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 SYNPOQ8N3V7 929 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 IQUBQ8NA54 791 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 SMG9Q9H0W8 520 aaKnown RBP20.14■□□□□ 0.81
CPSF2-203ENST00000554290 KIF9Q9HAQ2 790 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 RBM12Q9NTZ6 932 aaKnown RBP20.14■□□□□ 0.81
CPSF2-203ENST00000554290 TDP1Q9NUW8 608 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 INTS13Q9NVM9 706 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 SIX4Q9UIU6 781 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 GTF3C4Q9UKN8 822 aa20.14■□□□□ 0.81
CPSF2-203ENST00000554290 YEATS4O95619 227 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 PDIA4P13667 645 aaKnown RBP20.13■□□□□ 0.81
CPSF2-203ENST00000554290 CYP2F1P24903 491 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 ASIC1P78348 528 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 SATB1Q01826 763 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 TNK2Q07912 1038 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 GAS6Q14393 721 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 PON2Q15165 354 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 E2F4Q16254 413 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 DDR2Q16832 855 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 SOWAHAQ2M3V2 549 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 MON1AQ86VX9 555 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 HPS3Q969F9 1004 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 DHX58Q96C10 678 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 HPDLQ96IR7 371 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 GMEB2Q9UKD1 530 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 TCHHQ07283 1943 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 DMDP11532 3685 aa20.13■□□□□ 0.81
CPSF2-203ENST00000554290 OTOGLQ3ZCN5 2332 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 GABRDO14764 452 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 EIF3DO15371 548 aaKnown RBP eCLIP20.12■□□□□ 0.81
CPSF2-203ENST00000554290 PAPSS2O95340 614 aaPredicted RBP20.12■□□□□ 0.81
CPSF2-203ENST00000554290 SDHBP21912 280 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 GPR15P49685 360 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 CFAP221Q4G0U5 840 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 SDHAF4Q5VUM1 108 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 LMBRD2Q68DH5 695 aaPredicted RBP20.12■□□□□ 0.81
CPSF2-203ENST00000554290 TXNDC8Q6A555 127 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 SCARA3Q6AZY7 606 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 CC2D1AQ6P1N0 951 aaPredicted RBP20.12■□□□□ 0.81
CPSF2-203ENST00000554290 CNNM4Q6P4Q7 775 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 DGLUCYQ7Z3D6 616 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 CBWD2Q8IUF1 395 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 GLIS3Q8NEA6 775 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 USP13Q92995 863 aaPredicted RBP20.12■□□□□ 0.81
CPSF2-203ENST00000554290 TRMT2BQ96GJ1 504 aaKnown RBP20.12■□□□□ 0.81
CPSF2-203ENST00000554290 FUBP3Q96I24 572 aaKnown RBP eCLIP20.12■□□□□ 0.81
CPSF2-203ENST00000554290 FAM84AQ96KN4 292 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 PKMYT1Q99640 499 aa20.12■□□□□ 0.81
CPSF2-203ENST00000554290 FAM83CQ9BQN1 747 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms