RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CLEC16AQ2KHT3 1053 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 LIN9Q5TKA1 542 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 ARHGAP17Q68EM7 881 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 FUT10Q6P4F1 479 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 LCLAT1Q6UWP7 414 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 CD300LGQ6UXG3 332 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 ZNF662Q6ZS27 426 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 ANKS3Q6ZW76 656 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 DCP1BQ8IZD4 617 aaKnown RBP11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 B3GALNT2Q8NCR0 500 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 TWNKQ96RR1 684 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 ISCUQ9H1K1 167 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 CWH43Q9H720 699 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 SYNCQ9H7C4 482 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 LZTFL1Q9NQ48 299 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 HMGXB4Q9UGU5 601 aa11.1□□□□□ -0.63
TMEM55B-205ENST00000554028 SCN5AQ14524 2016 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 ANKRD62A6NC57 917 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 OR6C75A6NL08 312 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 M0QYV0 167 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 O00370 1275 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 KIF5CO60282 957 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 B4GALT3O60512 393 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 MICAL2O94851 1124 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 OAZ2O95190 189 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 CALCAP01258 141 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 CYP1A1P04798 512 aaPredicted RBP11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 ITGB1P05556 798 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 TMEM253P0C7T8 217 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 SETSIPP0DME0 302 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 MYBL1P10243 752 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 ACAT1P24752 427 aaKnown RBP11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 GPC5P78333 572 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 HTRA4P83105 476 aaPredicted RBP11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 PTPN14Q15678 1187 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 GOLGA7BQ2TAP0 167 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 USP41Q3LFD5 358 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 NAA35Q5VZE5 725 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 ZNF280DQ6N043 979 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 C4orf50Q6ZRC1 276 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 TMCO2Q7Z6W1 182 aaPredicted RBP11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 OSTM1Q86WC4 334 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 ERICH1Q86X53 443 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 PASD1Q8IV76 773 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 C12orf29Q8N999 325 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 COLGALT1Q8NBJ5 622 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 TFAP2BQ92481 460 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 IGSF21Q96ID5 467 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 VCPIP1Q96JH7 1222 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 PPP1R13BQ96KQ4 1090 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 CALR3Q96L12 384 aaKnown RBP11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 RNPC3Q96LT9 517 aaKnown RBP11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 PCDHB18PQ96TA0 734 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 TTPALQ9BTX7 342 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 FAM49BQ9NUQ9 324 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 CXXC1Q9P0U4 656 aaPredicted RBP11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 TSPAN16Q9UKR8 245 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 RWDD3Q9Y3V2 267 aa11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 MRPL42Q9Y6G3 142 aaKnown RBP11.09□□□□□ -0.63
TMEM55B-205ENST00000554028 TTC3P53804 2025 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 F8W810 466 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 KIF2AO00139 706 aaPredicted RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 ZNF263O14978 683 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 PJA2O43164 708 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 ZNF500O60304 480 aaPredicted RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 CALB1P05937 261 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 UNGP13051 313 aaPredicted RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 ABCB4P21439 1286 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 FGFR3P22607 806 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 IGFBP6P24592 240 aaPredicted RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 ADORA2BP29275 332 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 TKTP29401 623 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 PBX3P40426 434 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 MAGEA10P43363 369 aaPredicted RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 NOP2P46087 812 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 BCAT1P54687 386 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 GALCP54803 685 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 PSMC1P62191 440 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 NOMO3P69849 1222 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 SMARCB1Q12824 385 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 NFE2Q16621 373 aaPredicted RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 CTXN3Q4LDR2 81 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 MDH1BQ5I0G3 518 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 INTS6LQ5JSJ4 861 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 PPP1R26Q5T8A7 1209 aaPredicted RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 DENND1BQ6P3S1 775 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 SPATA2LQ8IUW3 424 aaPredicted RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 SLC39A11Q8N1S5 342 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 RNF10Q8N5U6 811 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 ANKRD52Q8NB46 1076 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 MYCBPAPQ8TBZ2 947 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 SLC2A14Q8TDB8 520 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 IPO4Q8TEX9 1081 aaKnown RBP11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 CPA5Q8WXQ8 436 aa11.08□□□□□ -0.64
TMEM55B-205ENST00000554028 HNRNPABQ99729 332 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms