RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DYNC1I1O14576 645 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 PRRG1O14668 218 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 SYN3O14994 580 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 NCAM2O15394 837 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 GCNT3O95395 438 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 UQCRHP07919 91 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 ATF2P15336 505 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 KCNE1P15382 129 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 RPL9P32969 192 aaKnown RBP17.19■□□□□ 0.34
ACTN1-209ENST00000553659 OSTNP61366 133 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 CDK17Q00537 523 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
ACTN1-209ENST00000553659 CSTF1Q05048 431 aaKnown RBP17.19■□□□□ 0.34
ACTN1-209ENST00000553659 ADAM9Q13443 819 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 MRPL58Q14197 206 aaKnown RBP17.19■□□□□ 0.34
ACTN1-209ENST00000553659 MYBPC2Q14324 1141 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 PUM1Q14671 1186 aaKnown RBP eCLIP17.19■□□□□ 0.34
ACTN1-209ENST00000553659 ZNF568Q3ZCX4 644 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 TANGO2Q6ICL3 276 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 POTEHQ6S545 545 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 TPRG1Q6ZUI0 275 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 TCEAL8Q8IYN2 117 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 ELSPBP1Q96BH3 223 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 DRC1Q96MC2 740 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 ZMAT2Q96NC0 199 aaKnown RBP17.19■□□□□ 0.34
ACTN1-209ENST00000553659 ACAP3Q96P50 834 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 TTYH3Q9C0H2 523 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 TBC1D7Q9P0N9 293 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 LARSQ9P2J5 1176 aaKnown RBP17.19■□□□□ 0.34
ACTN1-209ENST00000553659 ARHGAP28Q9P2N2 729 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 TTC26A0AVF1 554 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 H7C4K7 107 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 SPTLC1O15269 473 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 MICAL2O94851 1124 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 MCF2P10911 925 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 CEBPBP17676 345 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 PROZP22891 400 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 TARSP26639 723 aaKnown RBP17.18■□□□□ 0.34
ACTN1-209ENST00000553659 ABCD1P33897 745 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 RPS9P46781 194 aaKnown RBP17.18■□□□□ 0.34
ACTN1-209ENST00000553659 SNRPFP62306 86 aaKnown RBP17.18■□□□□ 0.34
ACTN1-209ENST00000553659 ETF1P62495 437 aaKnown RBP17.18■□□□□ 0.34
ACTN1-209ENST00000553659 GOLGA8FQ08AF8 430 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 RAD51AP2Q09MP3 1159 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 GOLGA8DPQ0D2H9 430 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 DMP1Q13316 513 aaPredicted RBP17.18■□□□□ 0.34
ACTN1-209ENST00000553659 PRSS36Q5K4E3 855 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 ZNF852Q6ZMS4 543 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 HS2ST1Q7LGA3 356 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 TAS1R3Q7RTX0 852 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 DGLUCYQ7Z3D6 616 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 TRIM59Q8IWR1 403 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 NELFCDQ8IXH7 590 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 CCDC170Q8IYT3 715 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 DAW1Q8N136 415 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 ATRIPQ8WXE1 791 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 CORO1BQ9BR76 489 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 TCHPQ9BT92 498 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 MKNK1Q9BUB5 465 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 TARS2Q9BW92 718 aaKnown RBP17.18■□□□□ 0.34
ACTN1-209ENST00000553659 KMT5AQ9NQR1 393 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 KCNG1Q9UIX4 513 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 MRPS17Q9Y2R5 130 aaKnown RBP17.18■□□□□ 0.34
ACTN1-209ENST00000553659 PCDHGA2Q9Y5H1 932 aa17.18■□□□□ 0.34
ACTN1-209ENST00000553659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.18■□□□□ 0.34
ACTN1-209ENST00000553659 ZNF197O14709 1029 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 HIP1RO75146 1068 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 SEC24AO95486 1093 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 EPB41P11171 864 aaKnown RBP17.17■□□□□ 0.34
ACTN1-209ENST00000553659 NR2F2P24468 414 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 CYLC1P35663 651 aaPredicted RBP17.17■□□□□ 0.34
ACTN1-209ENST00000553659 ARPP19P56211 112 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 FZD5Q13467 585 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 MEA1Q16626 185 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 TPGS2Q68CL5 300 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 REXO1L1PQ8IX06 675 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 GLIS3Q8NEA6 775 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 DNASE1L2Q92874 299 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 TMEM206Q9H813 350 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 C17orf75Q9HAS0 396 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 CYP4F11Q9HBI6 524 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 ZFP14Q9HCL3 533 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 HEBP1Q9NRV9 189 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 ZSCAN32Q9NX65 697 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 CNTN3Q9P232 1028 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 FBXL5Q9UKA1 691 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 NUB1Q9Y5A7 615 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 TICRRQ7Z2Z1 1910 aa17.17■□□□□ 0.34
ACTN1-209ENST00000553659 ABLIM1O14639 778 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 IPO7O95373 1038 aaKnown RBP17.16■□□□□ 0.34
ACTN1-209ENST00000553659 SCP2P22307 547 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 HNRNPH3P31942 346 aaKnown RBP17.16■□□□□ 0.34
ACTN1-209ENST00000553659 KRT83P78385 493 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 ADCY1Q08828 1119 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 CTXN3Q4LDR2 81 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 MPZL3Q6UWV2 235 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 ZNF720Q7Z2F6 126 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 TXLNBQ8N3L3 684 aa17.16■□□□□ 0.34
ACTN1-209ENST00000553659 ZBTB44Q8NCP5 570 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms