RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 V9GYQ6 96 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 ASXL1Q8IXJ9 1541 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 KCNJ13O60928 360 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 POLD2P49005 469 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 KCNQ4P56696 695 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 PDK1Q15118 436 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 TTC38Q5R3I4 469 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 SNRNP48Q6IEG0 339 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 STYK1Q6J9G0 422 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 PRPF39Q86UA1 669 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 SLC44A2Q8IWA5 706 aaPredicted RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 AADATQ8N5Z0 425 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 NTN4Q9HB63 628 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 CCNT2O60583 730 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 SNAP29O95721 258 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 GLULP15104 373 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 NR1H2P55055 460 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 MKRN3Q13064 507 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 ADRM1Q16186 407 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 UGP2Q16851 508 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 OR8H3Q8N146 312 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 FITM2Q8N6M3 262 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 OLFM1Q99784 485 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 PACSIN3Q9UKS6 424 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 UMODL1Q5DID0 1318 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 KRT87PA6NCN2 255 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 NMT2O60551 498 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 WDR47O94967 919 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 MAP3K6O95382 1288 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 MFAP3P55082 362 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 LSM3P62310 102 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 DBPQ10586 325 aaPredicted RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 KCTD2Q14681 263 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 NCAPHQ15003 741 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 MAJINQ3KP22 176 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 DIS3LQ8TF46 1054 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 HERVK_113Q902F9 699 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 UROC1Q96N76 676 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 EDEM3Q9BZQ6 932 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 PCDHB13Q9Y5F0 798 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 FYCO1Q9BQS8 1478 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 MROH7Q68CQ1 1323 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 EVPLLA8MZ36 301 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 INMTO95050 263 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 AFPP02771 609 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 CDK4P11802 303 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 MAPK12P53778 367 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 TRADDQ15628 312 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 STXBP2Q15833 593 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 PROSER3Q2NL68 480 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 ERMARDQ5T6L9 678 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 PGM2L1Q6PCE3 622 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 MICU2Q8IYU8 434 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 EXD1Q8NHP7 514 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 PPP4R1Q8TF05 950 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 YME1L1Q96TA2 773 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 EPB41L4AQ9HCS5 686 aaPredicted RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 F5H423 210 aaPredicted RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 KMOO15229 486 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 SLC1A4P43007 532 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 DYNLT1P63172 113 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 NFE2L1Q14494 772 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 SIGIRRQ6IA17 410 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 ZNF804AQ7Z570 1209 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 OR8H1Q8NGG4 311 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 LLPHQ9BRT6 129 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 KIFC3Q9BVG8 833 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 SLC13A1Q9BZW2 595 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 MAGEE1Q9HCI5 957 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 PCDHB6Q9Y5E3 794 aa9.37□□□□□ -0.91
GTF2A1-203ENST00000553612 ASS1P00966 412 aaKnown RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 HTR2BP41595 481 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 HSD17B4P51659 736 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 C6orf89Q6UWU4 347 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 NSMFQ6X4W1 530 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ACAD11Q709F0 780 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ESX1Q8N693 406 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 PIK3R3Q92569 461 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 OSBP2Q969R2 916 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 DBNDD2Q9BQY9 259 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 MLPHQ9BV36 600 aaPredicted RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 THAP9Q9H5L6 903 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 AVENQ9NQS1 362 aaPredicted RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 CYB5R1Q9UHQ9 305 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 TRMT6Q9UJA5 497 aaKnown RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 OGDHLQ9ULD0 1010 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 BAIAP2Q9UQB8 552 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 PI4K2BG5E9Z4 385 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 VWA5AO00534 786 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 LRRN2O75325 713 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 CDH1P12830 882 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ITIH1P19827 911 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 FGFR3P22607 806 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ART3Q13508 389 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 TOB2Q14106 344 aaPredicted RBP9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ARMC4Q5T2S8 1044 aa9.36□□□□□ -0.91
GTF2A1-203ENST00000553612 ERICH5Q6P6B1 374 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms