RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 SYTL5Q8TDW5 730 aaPredicted RBP5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 FNIP1Q8TF40 1166 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 ATG4AQ8WYN0 398 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 POMGNT1Q8WZA1 660 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 PRCCQ92733 491 aaPredicted RBP5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 UTP4Q969X6 686 aaKnown RBP5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 ERP27Q96DN0 273 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 TBC1D31Q96DN5 1066 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 CDHR1Q96JP9 859 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 BTBD6Q96KE9 485 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 SLITRK1Q96PX8 696 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 GMLQ99445 158 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 CGRRF1Q99675 332 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 HERPUD2Q9BSE4 406 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 FRMD8Q9BZ67 464 aaPredicted RBP5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 VPS33BQ9H267 617 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 VPS11Q9H270 941 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 TRABDQ9H4I3 376 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 FAM124BQ9H5Z6 455 aaPredicted RBP5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 ACSS3Q9H6R3 686 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 TDRD3Q9H7E2 651 aaKnown RBP5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 DCLRE1BQ9H816 532 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 VRTNQ9H8Y1 702 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 DBNDD1Q9H9R9 158 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 SLC38A10Q9HBR0 1119 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 ETNK1Q9HBU6 452 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 KCNK9Q9NPC2 374 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 MKS1Q9NXB0 559 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 COL20A1Q9P218 1284 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 ZMYND8Q9ULU4 1186 aaPredicted RBP5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 PHTF1Q9UMS5 762 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 CHKBQ9Y259 395 aa5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 R3HDM2Q9Y2K5 976 aaKnown RBP5.54□□□□□ -1.52
TMEM55B-204ENST00000553602 PARP14Q460N5 1801 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 GSTTP1A0A1W2PQM5 241 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 TMEM191CA6NGB0 347 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 A6NHS1 94 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 NFIBO00712 420 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 CLGNO14967 610 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 PPP1R12AO14974 1030 aaPredicted RBP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 HNRNPDLO14979 420 aaKnown RBP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 STBD1O95210 358 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 CCNE2O96020 404 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 ADH1BP00325 375 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 HLA-DRAP01903 254 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 C4BPAP04003 597 aaKnown RBP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 KRT1P04264 644 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 GSTA2P09210 222 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 TMEM191BP0C7N4 346 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 DHRS4L1P0CG22 281 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 TPBGLP0DKB5 382 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 SLURP2P0DP57 97 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 PECAM1P16284 738 aaPredicted RBP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 TAL1P17542 331 aaPredicted RBP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 ATP6V1C1P21283 382 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 EIF4BP23588 611 aaKnown RBP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 PTPN4P29074 926 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 PIK3CAP42336 1068 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 CDKN2BP42772 138 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 OAZ1P54368 228 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 GEMIN4P57678 1058 aaKnown RBP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 TAS2R40P59535 323 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 OCRLQ01968 901 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 SNX1Q13596 522 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 KRT72Q14CN4 511 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 ACAP1Q15027 740 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 PGM5Q15124 567 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 TMED2Q15363 201 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 HIF1AQ16665 826 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 UGCGQ16739 394 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 CTC1Q2NKJ3 1217 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 TSNAXIP1Q2TAA8 658 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 P3H1Q32P28 736 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 NBPF20Q3BBV1 942 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 XKR9Q5GH70 373 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 FAM102BQ5T8I3 360 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 WDR78Q5VTH9 848 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 ZNF772Q68DY9 489 aaPredicted RBP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 CIAPIN1Q6FI81 312 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 NSMFQ6X4W1 530 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 SPOCD1Q6ZMY3 1216 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 BBS12Q6ZW61 710 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 ANO5Q75V66 913 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 APBB1IPQ7Z5R6 666 aaPredicted RBP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 CLNKQ7Z7G1 428 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 ERICH1Q86X53 443 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 VSIG1Q86XK7 387 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 LMNTD2Q8IXW0 634 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 PPIL6Q8IXY8 311 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 FAM13CQ8NE31 585 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 IL31RAQ8NI17 732 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 UHMK1Q8TAS1 419 aaKnown RBP5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 GDAP1Q8TB36 358 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 RAB3IL1Q8TBN0 382 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 MGARPQ8TDB4 240 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 ASAP3Q8TDY4 903 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 MZB1Q8WU39 189 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 CCDC127Q96BQ5 260 aa5.53□□□□□ -1.52
TMEM55B-204ENST00000553602 SLC7A6OSQ96CW6 309 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms