RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 PABPC1LQ4VXU2 614 aaKnown RBP24.37■■□□□ 1.49
TDP1-206ENST00000553569 CAVIN1Q6NZI2 390 aaKnown RBP24.37■■□□□ 1.49
TDP1-206ENST00000553569 SPATA2LQ8IUW3 424 aaPredicted RBP24.37■■□□□ 1.49
TDP1-206ENST00000553569 TRIM59Q8IWR1 403 aa24.37■■□□□ 1.49
TDP1-206ENST00000553569 MYLPFQ96A32 169 aa24.37■■□□□ 1.49
TDP1-206ENST00000553569 NIF3L1Q9GZT8 377 aa24.37■■□□□ 1.49
TDP1-206ENST00000553569 CEP72Q9P209 647 aa24.37■■□□□ 1.49
TDP1-206ENST00000553569 NOTCH4Q99466 2003 aa24.37■■□□□ 1.49
TDP1-206ENST00000553569 RHOP08100 348 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 ERCC5P28715 1186 aaPredicted RBP24.36■■□□□ 1.49
TDP1-206ENST00000553569 GBP2P32456 591 aaPredicted RBP24.36■■□□□ 1.49
TDP1-206ENST00000553569 EPHB3P54753 998 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 MDH1BQ5I0G3 518 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 WDR44Q5JSH3 913 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 IQCEQ6IPM2 695 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 OTOP3Q7RTS5 596 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 FAM200AQ8TCP9 573 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 ZNF512Q96ME7 567 aaPredicted RBP24.36■■□□□ 1.49
TDP1-206ENST00000553569 LPIN3Q9BQK8 851 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 DNAJC25Q9H1X3 360 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 HSFX1Q9UBD0 423 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 A0A0C4DFX4 3053 aa24.36■■□□□ 1.49
TDP1-206ENST00000553569 TNFRSF10AO00220 468 aa24.35■■□□□ 1.49
TDP1-206ENST00000553569 N4BP1O75113 896 aaKnown RBP24.35■■□□□ 1.49
TDP1-206ENST00000553569 HAPLN1P10915 354 aaPredicted RBP24.35■■□□□ 1.49
TDP1-206ENST00000553569 PTPN2P17706 415 aa24.35■■□□□ 1.49
TDP1-206ENST00000553569 TUFMP49411 452 aaKnown RBP24.35■■□□□ 1.49
TDP1-206ENST00000553569 MARSP56192 900 aaKnown RBP24.35■■□□□ 1.49
TDP1-206ENST00000553569 CYP27A1Q02318 531 aa24.35■■□□□ 1.49
TDP1-206ENST00000553569 FAM171BQ6P995 826 aa24.35■■□□□ 1.49
TDP1-206ENST00000553569 HS6ST3Q8IZP7 471 aa24.35■■□□□ 1.49
TDP1-206ENST00000553569 ACSF2Q96CM8 615 aaPredicted RBP24.35■■□□□ 1.49
TDP1-206ENST00000553569 MYADMQ96S97 322 aa24.35■■□□□ 1.49
TDP1-206ENST00000553569 BCO2Q9BYV7 579 aa24.35■■□□□ 1.49
TDP1-206ENST00000553569 HMGXB4Q9UGU5 601 aa24.35■■□□□ 1.49
TDP1-206ENST00000553569 USTQ9Y2C2 406 aa24.35■■□□□ 1.49
TDP1-206ENST00000553569 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.35■■□□□ 1.49
TDP1-206ENST00000553569 DOCK8Q8NF50 2099 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 TTC28Q96AY4 2481 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 PTPN1P18031 435 aaKnown RBP24.34■■□□□ 1.49
TDP1-206ENST00000553569 ATF6P18850 670 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 CYP2F1P24903 491 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 GPR15P49685 360 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 ORC1Q13415 861 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 MAPRE1Q15691 268 aaKnown RBP24.34■■□□□ 1.49
TDP1-206ENST00000553569 STX1AQ16623 288 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 C4orf50Q6ZRC1 276 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 B3GALNT2Q8NCR0 500 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 ITFG1Q8TB96 612 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 ING5Q8WYH8 240 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 ABCB6Q9NP58 842 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 COQ4Q9Y3A0 265 aa24.34■■□□□ 1.49
TDP1-206ENST00000553569 PTPRDP23468 1912 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 AFPP02771 609 aaKnown RBP24.33■■□□□ 1.49
TDP1-206ENST00000553569 MYL4P12829 197 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 CD58P19256 250 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 NDST1P52848 882 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 KCNH2Q12809 1159 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 VEPH1Q14D04 833 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 SLC5A9Q2M3M2 681 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 HSP90AA4PQ58FG1 418 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 SDHAF4Q5VUM1 108 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 C11orf57Q6ZUT1 292 aaPredicted RBP24.33■■□□□ 1.49
TDP1-206ENST00000553569 PDZD4Q76G19 769 aaPredicted RBP24.33■■□□□ 1.49
TDP1-206ENST00000553569 RNF135Q8IUD6 432 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 MYCBPAPQ8TBZ2 947 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 GPR152Q8TDT2 470 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 GIPC2Q8TF65 315 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 TATDN2Q93075 761 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 PCED1BQ96HM7 432 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 THAP9Q9H5L6 903 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 CYP3A43Q9HB55 503 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 ASAH2Q9NR71 780 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 ANO10Q9NW15 660 aa24.33■■□□□ 1.49
TDP1-206ENST00000553569 MAGEC2Q9UBF1 373 aaPredicted RBP24.33■■□□□ 1.49
TDP1-206ENST00000553569 MRPS23Q9Y3D9 190 aaKnown RBP24.33■■□□□ 1.49
TDP1-206ENST00000553569 MTIF2P46199 727 aaKnown RBP24.32■■□□□ 1.48
TDP1-206ENST00000553569 LRMPQ12912 555 aa24.32■■□□□ 1.48
TDP1-206ENST00000553569 CT47A1Q5JQC4 288 aaPredicted RBP24.32■■□□□ 1.48
TDP1-206ENST00000553569 ACOT1Q86TX2 421 aa24.32■■□□□ 1.48
TDP1-206ENST00000553569 IRF2BP1Q8IU81 584 aa24.32■■□□□ 1.48
TDP1-206ENST00000553569 SCN4BQ8IWT1 228 aa24.32■■□□□ 1.48
TDP1-206ENST00000553569 STKLD1Q8NE28 680 aa24.32■■□□□ 1.48
TDP1-206ENST00000553569 TCEAL4Q96EI5 215 aa24.32■■□□□ 1.48
TDP1-206ENST00000553569 FUBP3Q96I24 572 aaKnown RBP eCLIP24.32■■□□□ 1.48
TDP1-206ENST00000553569 TNIP3Q96KP6 325 aa24.32■■□□□ 1.48
TDP1-206ENST00000553569 NCOR1O75376 2440 aa24.32■■□□□ 1.48
TDP1-206ENST00000553569 BDNFP23560 247 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 CETN1Q12798 172 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 CFAP221Q4G0U5 840 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 CYP4A22Q5TCH4 519 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 ITIH5Q86UX2 942 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 FAM114A1Q8IWE2 563 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 ZDHHC14Q8IZN3 488 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 PLCD3Q8N3E9 789 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 KHSRPQ92945 711 aaKnown RBP eCLIP24.31■■□□□ 1.48
TDP1-206ENST00000553569 PSMG2Q969U7 264 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 ARID3AQ99856 593 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 LIMD1Q9UGP4 676 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 MUTYHQ9UIF7 546 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms