RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 FRYLO94915 3013 aa13.7□□□□□ -0.22
LINC00643-202ENST00000553426 EP300Q09472 2414 aaPredicted RBP13.7□□□□□ -0.22
LINC00643-202ENST00000553426 F5P12259 2224 aa13.7□□□□□ -0.22
LINC00643-202ENST00000553426 ANK1P16157 1881 aa13.7□□□□□ -0.22
LINC00643-202ENST00000553426 COL4A3Q01955 1670 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 TCHHQ07283 1943 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 ZNF292O60281 2723 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 SLC38A8A6NNN8 435 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 SOBPA7XYQ1 873 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 ARNTLO00327 626 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 WNT7BP56706 349 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 E2F4Q16254 413 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 DUOXA2Q1HG44 320 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 INTS6LQ5JSJ4 861 aaKnown RBP13.69□□□□□ -0.22
LINC00643-202ENST00000553426 DGKKQ5KSL6 1271 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 FAM26FQ5R3K3 315 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 DPH6Q7L8W6 267 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 HS2ST1Q7LGA3 356 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 SPATA2LQ8IUW3 424 aaPredicted RBP13.69□□□□□ -0.22
LINC00643-202ENST00000553426 KIAA2013Q8IYS2 634 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 ADGRF2Q8IZF7 708 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 ZBTB44Q8NCP5 570 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 LEO1Q8WVC0 666 aaPredicted RBP13.69□□□□□ -0.22
LINC00643-202ENST00000553426 FNBP1Q96RU3 617 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 MKNK1Q9BUB5 465 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 FGFBP2Q9BYJ0 223 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 INTS13Q9NVM9 706 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 HSPBP1Q9NZL4 362 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 MAGED2Q9UNF1 606 aaPredicted RBP13.69□□□□□ -0.22
LINC00643-202ENST00000553426 TSC2P49815 1807 aa13.69□□□□□ -0.22
LINC00643-202ENST00000553426 ZFHX4Q86UP3 3567 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 MYBPHLA2RUH7 354 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 SHISA7A6NL88 538 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 SPECC1L-ADORA2AF8WAN1 911 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 ACAT1P24752 427 aaKnown RBP13.68□□□□□ -0.22
LINC00643-202ENST00000553426 CXCL12P48061 93 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 ME1P48163 572 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 NLRP12P59046 1061 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 SNRPFP62306 86 aaKnown RBP13.68□□□□□ -0.22
LINC00643-202ENST00000553426 AMPD2Q01433 879 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 ITPRIPL2Q3MIP1 535 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 FOXD4L6Q3SYB3 417 aaPredicted RBP13.68□□□□□ -0.22
LINC00643-202ENST00000553426 FOXD4L5Q5VV16 416 aaPredicted RBP13.68□□□□□ -0.22
LINC00643-202ENST00000553426 ATL3Q6DD88 541 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 CC2D1AQ6P1N0 951 aaPredicted RBP13.68□□□□□ -0.22
LINC00643-202ENST00000553426 TSSK4Q6SA08 328 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 FOXD4L3Q6VB84 417 aaPredicted RBP13.68□□□□□ -0.22
LINC00643-202ENST00000553426 C4orf50Q6ZRC1 276 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 WDR49Q8IV35 697 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 ZNF687Q8N1G0 1237 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 GPR161Q8N6U8 529 aaKnown RBP13.68□□□□□ -0.22
LINC00643-202ENST00000553426 MAB21L3Q8N8X9 362 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 FSIP1Q8NA03 581 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 SUMF1Q8NBK3 374 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 FOXD4L4Q8WXT5 416 aaPredicted RBP13.68□□□□□ -0.22
LINC00643-202ENST00000553426 HPDLQ96IR7 371 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 ZFYVE19Q96K21 471 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 SLC46A2Q9BY10 475 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 KIF9Q9HAQ2 790 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 IL21Q9HBE4 155 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 GTSE1Q9NYZ3 720 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 CFAP45Q9UL16 551 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 RAB23Q9ULC3 237 aa13.68□□□□□ -0.22
LINC00643-202ENST00000553426 NCANO14594 1321 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 UBE4BO95155 1302 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 TICRRQ7Z2Z1 1910 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 MED19A0JLT2 244 aaPredicted RBP13.67□□□□□ -0.22
LINC00643-202ENST00000553426 POLR2DO15514 142 aaKnown RBP13.67□□□□□ -0.22
LINC00643-202ENST00000553426 PRAMEF12O95522 483 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 ZSCAN22P10073 491 aaPredicted RBP13.67□□□□□ -0.22
LINC00643-202ENST00000553426 CHRNB1P11230 501 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 TNNI1P19237 187 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 CYP2F1P24903 491 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 CTHP32929 405 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 MAPRE1Q15691 268 aaKnown RBP13.67□□□□□ -0.22
LINC00643-202ENST00000553426 SNRNP35Q16560 246 aaKnown RBP13.67□□□□□ -0.22
LINC00643-202ENST00000553426 CFAP221Q4G0U5 840 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 LMBRD2Q68DH5 695 aaPredicted RBP13.67□□□□□ -0.22
LINC00643-202ENST00000553426 CNNM4Q6P4Q7 775 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 UNC13DQ70J99 1090 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 CBWD2Q8IUF1 395 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 SYNPOQ8N3V7 929 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 SPEM1Q8N4L4 309 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 TTC8Q8TAM2 541 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 ZNF507Q8TCN5 953 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 NELL1Q92832 810 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 HPS3Q969F9 1004 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 EXOC4Q96A65 974 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 FUBP3Q96I24 572 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC00643-202ENST00000553426 MMS19Q96T76 1030 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 C7orf25Q9BPX7 421 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 TMLHEQ9NVH6 421 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 CGNQ9P2M7 1197 aaKnown RBP13.67□□□□□ -0.22
LINC00643-202ENST00000553426 SIX4Q9UIU6 781 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 GTF3C4Q9UKN8 822 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 PATJQ8NI35 1801 aa13.67□□□□□ -0.22
LINC00643-202ENST00000553426 CACNA1AO00555 2505 aa13.66□□□□□ -0.22
LINC00643-202ENST00000553426 GABRDO14764 452 aa13.66□□□□□ -0.22
LINC00643-202ENST00000553426 LILRB5O75023 590 aa13.66□□□□□ -0.22
LINC00643-202ENST00000553426 F13A1P00488 732 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms