RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 JOSD2Q8TAC2 188 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 UBA3Q8TBC4 463 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 TRIM51Q9BSJ1 452 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 TXLNGYQ9BZA5 131 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 DCLK3Q9C098 648 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 NXF3Q9H4D5 531 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 CHST12Q9NRB3 414 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 HOMER3Q9NSC5 361 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ZDHHC18Q9NUE0 388 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 GDAP2Q9NXN4 497 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 TJP2Q9UDY2 1190 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 TUBGCP4Q9UGJ1 667 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ABT1Q9ULW3 272 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 USTQ9Y2C2 406 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 TRPV2Q9Y5S1 764 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 H0YGN5 161 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 SPTLC1O15269 473 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 XPOTO43592 962 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 OPA1O60313 960 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 PGK1P00558 417 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 CHRNA1P02708 482 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 ERBB2P04626 1255 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 SETSIPP0DME0 302 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 ATF7P17544 494 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 LRPAP1P30533 357 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 PTPN7P35236 360 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 FLT3P36888 993 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 KCNJ1P48048 391 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 COPS2P61201 443 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 MGAT3Q09327 533 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 ACAP1Q15027 740 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 SOWAHAQ2M3V2 549 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 CFAP58Q5T655 872 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 CYP4A22Q5TCH4 519 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 CYP4F22Q6NT55 531 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 CXCL17Q6UXB2 119 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 LRIG3Q6UXM1 1119 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 SYDE1Q6ZW31 735 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 DPH6Q7L8W6 267 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 TMEM110Q86TL2 294 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 SERINC5Q86VE9 423 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 STK32AQ8WU08 396 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 SLC35F5Q8WV83 523 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 C1orf54Q8WWF1 131 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 KHSRPQ92945 711 aaKnown RBP eCLIP9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 LRRC45Q96CN5 670 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 ZIM3Q96PE6 472 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 CPXM1Q96SM3 734 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 SLC4A5Q9BY07 1137 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 OSBPL8Q9BZF1 889 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 TRIM6Q9C030 488 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 DPH5Q9H2P9 285 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 SPC25Q9HBM1 224 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 RNF186Q9NXI6 227 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 DDX56Q9NY93 547 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 PSD3Q9NYI0 1048 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 GRHL1Q9NZI5 618 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 KLK14Q9P0G3 267 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 PARP2Q9UGN5 583 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 FEZ2Q9UHY8 353 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 PIN4Q9Y237 131 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 DRG1Q9Y295 367 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 FAN1Q9Y2M0 1017 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 SNX24Q9Y343 169 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 NEU2Q9Y3R4 380 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 IPPQ9Y573 584 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 SNX9Q9Y5X1 595 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 NFS1Q9Y697 457 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 CDY2AQ9Y6F7 541 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 ANK1P16157 1881 aa9.91□□□□□ -0.82
MTHFD1-203ENST00000553391 KAT6AQ92794 2004 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 GRIN2DO15399 1336 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 GOLGA6BA6NDN3 693 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 KPNA7A9QM74 516 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 HSF2BPO75031 334 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 PPFIA2O75334 1257 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 GABBR2O75899 941 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 RPLP2P05387 115 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 RARBP10826 455 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 RALAP11233 206 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 FGFR1P11362 822 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 TCF4P15884 667 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 IVDP26440 423 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 CST5P28325 142 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 GBP1P32455 592 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 GNL1P36915 607 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 CETN2P41208 172 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 PNPLA4P41247 253 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 RPL34P49207 117 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 SP3Q02447 781 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 PRKCZQ05513 592 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 SOX4Q06945 474 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 NFX1Q12986 1120 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 NOGQ13253 232 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 HLTFQ14527 1009 aaKnown RBP eCLIP9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 UAP1Q16222 522 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 KCNA10Q16322 511 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 TAZQ16635 292 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 HSP90B2PQ58FF3 399 aa9.9□□□□□ -0.82
MTHFD1-203ENST00000553391 SPDYCQ5MJ68 293 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms