RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 DCP1BQ8IZD4 617 aaKnown RBP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 SYCP3Q8IZU3 236 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 BPIFB1Q8TDL5 484 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 GIPC2Q8TF65 315 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 C2orf15Q8WU43 125 aaKnown RBP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 TMEM209Q96SK2 561 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 DNAJC25Q9H1X3 360 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 CRISPLD1Q9H336 500 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 MRPL44Q9H9J2 332 aaKnown RBP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 RBM12Q9NTZ6 932 aaKnown RBP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 DPP3Q9NY33 737 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 DLL3Q9NYJ7 618 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 CCDC39Q9UFE4 941 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 MAGED2Q9UNF1 606 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 EXOC7Q9UPT5 735 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 PI4KAP42356 2102 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 MYO18AQ92614 2054 aaKnown RBP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 CLSTN1O94985 981 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 IL18RAPO95256 599 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 PIGRP01833 764 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 CENPBP07199 599 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-208ENST00000553370 RETP07949 1114 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 TFAMQ00059 246 aaKnown RBP10.69□□□□□ -0.7
ACTN1-208ENST00000553370 FCHO2Q0JRZ9 810 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 SMARCB1Q12824 385 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 ZBTB6Q15916 424 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 Q6ZS52 159 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 GAREM2Q75VX8 874 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 DYMQ7RTS9 669 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 OR10T2Q8NGX3 314 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 SPPL2BQ8TCT7 592 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 MRPS31Q92665 395 aaKnown RBP10.69□□□□□ -0.7
ACTN1-208ENST00000553370 GLMNQ92990 594 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 EXOC4Q96A65 974 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 RSPRY1Q96DX4 576 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 KIF2CQ99661 725 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 RTKNQ9BST9 563 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 SMG9Q9H0W8 520 aaKnown RBP10.69□□□□□ -0.7
ACTN1-208ENST00000553370 ASB7Q9H672 318 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 TASP1Q9H6P5 420 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 GTSE1Q9NYZ3 720 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 ZMYM5Q9UJ78 669 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 CPSF3Q9UKF6 684 aaKnown RBP10.69□□□□□ -0.7
ACTN1-208ENST00000553370 SLC8A2Q9UPR5 921 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 C2CD2Q9Y426 696 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 PCDHB5Q9Y5E4 795 aa10.69□□□□□ -0.7
ACTN1-208ENST00000553370 GON4LQ3T8J9 2241 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 NCANO14594 1321 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 CEP295Q9C0D2 2601 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 DCDC2BA2VCK2 349 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 HUS1O60921 280 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 LRP3O75074 770 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 PRPF40AO75400 957 aaKnown RBP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 VNN2O95498 520 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 PRAMEF12O95522 483 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 KRT19P08727 400 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 CCDC192P0DO97 292 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 CHRNB1P11230 501 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 CNR2P34972 360 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 PNPLA4P41247 253 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 GCGRP47871 477 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 ZNF131P52739 623 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 ATXN1P54253 815 aaKnown RBP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 MLLT6P55198 1093 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 AMPD2Q01433 879 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 GRSF1Q12849 480 aaKnown RBP eCLIP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 FZD5Q13467 585 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 POSTNQ15063 836 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 SF3A1Q15459 793 aaKnown RBP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 PROX2Q3B8N5 592 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 C8orf34Q49A92 452 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 AASDHQ4L235 1098 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 ZC2HC1CQ53FD0 456 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 LONP2Q86WA8 852 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 SFR1Q86XK3 245 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 C12orf50Q8NA57 414 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 NETO1Q8TDF5 533 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 CACTINQ8WUQ7 758 aaKnown RBP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 NELL1Q92832 810 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 HVCN1Q96D96 273 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 FAM213AQ9BRX8 229 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 ZCWPW1Q9H0M4 648 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 TRPC7Q9HCX4 862 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 OBP2AQ9NY56 170 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 TBC1D7Q9P0N9 293 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 HSFX1Q9UBD0 423 aa10.68□□□□□ -0.7
ACTN1-208ENST00000553370 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.68□□□□□ -0.7
ACTN1-208ENST00000553370 LAMA1P25391 3075 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 CEP192Q8TEP8 1941 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 MYBPHLA2RUH7 354 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 POM121CA8CG34 1229 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 KPNA7A9QM74 516 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 TISP43B9A030 160 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 ANKRD63C9JTQ0 380 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 ARNTLO00327 626 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 PIRO00625 290 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 FAM189A1O60320 539 aa10.67□□□□□ -0.7
ACTN1-208ENST00000553370 FOXD2O60548 495 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-208ENST00000553370 ATG13O75143 517 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms