RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 CT47A1Q5JQC4 288 aaPredicted RBP15.08■□□□□ 0
PTCH1-226ENST00000553011 FAM171BQ6P995 826 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 GRASPQ7Z6J2 395 aaPredicted RBP15.08■□□□□ 0
PTCH1-226ENST00000553011 CCDC150Q8NCX0 1101 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 SPPL2BQ8TCT7 592 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 TATDN2Q93075 761 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 SEPT5Q99719 369 aaPredicted RBP15.08■□□□□ 0
PTCH1-226ENST00000553011 COL25A1Q9BXS0 654 aaPredicted RBP15.08■□□□□ 0
PTCH1-226ENST00000553011 BCO2Q9BYV7 579 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 NIF3L1Q9GZT8 377 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 THAP9Q9H5L6 903 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 WDR6Q9NNW5 1121 aaKnown RBP15.08■□□□□ 0
PTCH1-226ENST00000553011 CD320Q9NPF0 282 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 CEP72Q9P209 647 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 DNMT3BQ9UBC3 853 aaKnown RBP15.08■□□□□ 0
PTCH1-226ENST00000553011 PRKAG3Q9UGI9 489 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 HMGXB4Q9UGU5 601 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 PCDHB5Q9Y5E4 795 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 CLUHO75153 1309 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 A8MXQ7 604 aa15.07■□□□□ 0
PTCH1-226ENST00000553011 N4BP1O75113 896 aaKnown RBP15.07■□□□□ 0
PTCH1-226ENST00000553011 AFPP02771 609 aaKnown RBP15.07■□□□□ 0
PTCH1-226ENST00000553011 HAPLN1P10915 354 aaPredicted RBP15.07■□□□□ 0
PTCH1-226ENST00000553011 PTMSP20962 102 aa15.07■□□□□ 0
PTCH1-226ENST00000553011 SMARCB1Q12824 385 aa15.07■□□□□ 0
PTCH1-226ENST00000553011 ORC1Q13415 861 aa15.07■□□□□ 0
PTCH1-226ENST00000553011 MGAT5BQ3V5L5 792 aa15.07■□□□□ 0
PTCH1-226ENST00000553011 MDH1BQ5I0G3 518 aa15.07■□□□□ 0
PTCH1-226ENST00000553011 WDR44Q5JSH3 913 aa15.07■□□□□ 0
PTCH1-226ENST00000553011 C2orf15Q8WU43 125 aaKnown RBP15.07■□□□□ 0
PTCH1-226ENST00000553011 MYLPFQ96A32 169 aa15.07■□□□□ 0
PTCH1-226ENST00000553011 DNAJC25Q9H1X3 360 aa15.07■□□□□ 0
PTCH1-226ENST00000553011 SAMSN1Q9NSI8 373 aaKnown RBP15.07■□□□□ 0
PTCH1-226ENST00000553011 NFE2L3Q9Y4A8 694 aa15.07■□□□□ 0
PTCH1-226ENST00000553011 OBSL1O75147 1896 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 C19orf67A6NJJ6 358 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 PMM2O15305 246 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 PTPN1P18031 435 aaKnown RBP15.06■□□□□ 0
PTCH1-226ENST00000553011 CD58P19256 250 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 CYP2F1P24903 491 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 SSTR3P32745 418 aaPredicted RBP15.06■□□□□ 0
PTCH1-226ENST00000553011 MTIF2P46199 727 aaKnown RBP15.06■□□□□ 0
PTCH1-226ENST00000553011 NDST1P52848 882 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 LRMPQ12912 555 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 SPATA2LQ8IUW3 424 aaPredicted RBP15.06■□□□□ 0
PTCH1-226ENST00000553011 MYCBPAPQ8TBZ2 947 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 ENOX1Q8TC92 643 aaKnown RBP15.06■□□□□ 0
PTCH1-226ENST00000553011 ARID3AQ99856 593 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 CORO1BQ9BR76 489 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 CYP3A43Q9HB55 503 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 HSFX1Q9UBD0 423 aa15.06■□□□□ 0
PTCH1-226ENST00000553011 C2CD4DB7Z1M9 353 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 LOC730098B7Z3J9 87 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 P4HA2O15460 535 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 RHOP08100 348 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 ATF6P18850 670 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 ALDH1A3P47895 512 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 TUFMP49411 452 aaKnown RBP15.05■□□□□ -0
PTCH1-226ENST00000553011 GPR15P49685 360 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 EPHB3P54753 998 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 CYP27A1Q02318 531 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 INCA1Q0VD86 236 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 PLD1Q13393 1074 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 PABPC1LQ4VXU2 614 aaKnown RBP15.05■□□□□ -0
PTCH1-226ENST00000553011 SDHAF4Q5VUM1 108 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 GET4Q7L5D6 327 aaPredicted RBP15.05■□□□□ -0
PTCH1-226ENST00000553011 ACOT1Q86TX2 421 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 FAM114A1Q8IWE2 563 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 HS6ST3Q8IZP7 471 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 GJD3Q8N144 294 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 ELMOD1Q8N336 334 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 B3GALNT2Q8NCR0 500 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 LMO3Q8TAP4 145 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 ITFG1Q8TB96 612 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 PCED1BQ96HM7 432 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 ZNF512Q96ME7 567 aaPredicted RBP15.05■□□□□ -0
PTCH1-226ENST00000553011 TWNKQ96RR1 684 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 ABCB6Q9NP58 842 aa15.05■□□□□ -0
PTCH1-226ENST00000553011 MAGEC2Q9UBF1 373 aaPredicted RBP15.05■□□□□ -0
PTCH1-226ENST00000553011 ANAPC1Q9H1A4 1944 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 SYCE3A1L190 88 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 KCNJ18B7U540 433 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 NRG2O14511 850 aaPredicted RBP15.04■□□□□ -0
PTCH1-226ENST00000553011 CILPO75339 1184 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 PTPN2P17706 415 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 FSHRP23945 695 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 CETN1Q12798 172 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 KCNJ12Q14500 433 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 MAPRE1Q15691 268 aaKnown RBP15.04■□□□□ -0
PTCH1-226ENST00000553011 MAN2A1Q16706 1144 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 SLC5A9Q2M3M2 681 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 CFAP221Q4G0U5 840 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 ANO6Q4KMQ2 910 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 IQCEQ6IPM2 695 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 C4orf50Q6ZRC1 276 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 UNC93AQ86WB7 457 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 STKLD1Q8NE28 680 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 GPR152Q8TDT2 470 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 WHAMMQ8TF30 809 aa15.04■□□□□ -0
PTCH1-226ENST00000553011 GIPC2Q8TF65 315 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms