RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 RPL9P32969 192 aaKnown RBP9.53□□□□□ -0.88
PRKCH-203ENST00000552875 MCM4P33991 863 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 TUFMP49411 452 aaKnown RBP9.53□□□□□ -0.88
PRKCH-203ENST00000552875 YARSP54577 528 aaKnown RBP9.53□□□□□ -0.88
PRKCH-203ENST00000552875 YWHAHQ04917 246 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-203ENST00000552875 TARDBPQ13148 414 aaKnown RBP eCLIP9.53□□□□□ -0.88
PRKCH-203ENST00000552875 ZNF268Q14587 947 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-203ENST00000552875 MTF1Q14872 753 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 HLA-BQ31612 363 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 CD300LGQ6UXG3 332 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 SLC41A1Q8IVJ1 513 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 MAB21L3Q8N8X9 362 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 IL17RCQ8NAC3 791 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 BICD2Q8TD16 824 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 SNRNP27Q8WVK2 155 aaKnown RBP9.53□□□□□ -0.88
PRKCH-203ENST00000552875 TMEM87BQ96K49 555 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 TOPORSQ9NS56 1045 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-203ENST00000552875 HSFX1Q9UBD0 423 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 CCL26Q9Y258 94 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 GDAQ9Y2T3 454 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 IGHV1OR15-9A0A0B4J2B8 117 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 OR6C75A6NL08 312 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 P4HBP07237 508 aaKnown RBP9.52□□□□□ -0.89
PRKCH-203ENST00000552875 CYP21A2P08686 494 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 TIE1P35590 1138 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 MYO1EQ12965 1108 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 GPR17Q13304 367 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 CAPSQ13938 189 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 SF3A1Q15459 793 aaKnown RBP9.52□□□□□ -0.89
PRKCH-203ENST00000552875 DCAF4L1Q3SXM0 396 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 XKR9Q5GH70 373 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 ANKRD45Q5TZF3 282 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 XKR5Q6UX68 686 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 USP37Q86T82 979 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 ERICH1Q86X53 443 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 NOSTRINQ8IVI9 506 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 ZBTB8OSQ8IWT0 167 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 TTC16Q8NEE8 873 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 MRPS31Q92665 395 aaKnown RBP9.52□□□□□ -0.89
PRKCH-203ENST00000552875 DDX12PQ92771 950 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 NAF1Q96HR8 494 aaKnown RBP9.52□□□□□ -0.89
PRKCH-203ENST00000552875 SUSD3Q96L08 255 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 CCDC43Q96MW1 224 aaKnown RBP9.52□□□□□ -0.89
PRKCH-203ENST00000552875 IL21RQ9HBE5 538 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 GOLGA2P5Q9HBQ8 144 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 LRRC4CQ9HCJ2 640 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 CALCOCO1Q9P1Z2 691 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 FNDC3AQ9Y2H6 1198 aaKnown RBP9.52□□□□□ -0.89
PRKCH-203ENST00000552875 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
PRKCH-203ENST00000552875 MGAQ8IWI9 3026 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 PI4KAP42356 2102 aa9.52□□□□□ -0.89
PRKCH-203ENST00000552875 DOPEY2Q9Y3R5 2298 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 ESYT2A0FGR8 921 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 RFPL3O75679 317 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 APODP05090 189 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 SFTPCP11686 197 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 HNRNPLP14866 589 aaKnown RBP eCLIP9.51□□□□□ -0.89
PRKCH-203ENST00000552875 IGFBP6P24592 240 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-203ENST00000552875 MCM5P33992 734 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 LIFRP42702 1097 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 ANTXR2P58335 489 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 FAM160A1Q05DH4 1040 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 PRPF4BQ13523 1007 aaKnown RBP9.51□□□□□ -0.89
PRKCH-203ENST00000552875 CENPPQ6IPU0 288 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 ARMCX5Q6P1M9 558 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 NUDT18Q6ZVK8 323 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 SGMS1Q86VZ5 419 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 MICU3Q86XE3 530 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 DHX40Q8IX18 779 aaKnown RBP9.51□□□□□ -0.89
PRKCH-203ENST00000552875 C4orf19Q8IY42 314 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 EFCAB13Q8IY85 973 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 ZNF579Q8NAF0 562 aaKnown RBP9.51□□□□□ -0.89
PRKCH-203ENST00000552875 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 OXER1Q8TDS5 423 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 KCNE4Q8WWG9 221 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 ZNF578Q96N58 590 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-203ENST00000552875 MTMR9Q96QG7 549 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 LPIN3Q9BQK8 851 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 DPH1Q9BZG8 443 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 MIR1-1HGQ9H1L0 117 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 SLKQ9H2G2 1235 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-203ENST00000552875 OSBPL3Q9H4L5 887 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 PDZD7Q9H5P4 517 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 SLC27A5Q9Y2P5 690 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 TNRC6BQ9UPQ9 1833 aaKnown RBP9.51□□□□□ -0.89
PRKCH-203ENST00000552875 CNTNAP5Q8WYK1 1306 aa9.51□□□□□ -0.89
PRKCH-203ENST00000552875 GOLGA4Q13439 2230 aaKnown RBP9.51□□□□□ -0.89
PRKCH-203ENST00000552875 NUP210Q8TEM1 1887 aaPredicted RBP9.51□□□□□ -0.89
PRKCH-203ENST00000552875 ADAMTS9Q9P2N4 1935 aa9.5□□□□□ -0.89
PRKCH-203ENST00000552875 SMIM28A0A1B0GU29 152 aa9.5□□□□□ -0.89
PRKCH-203ENST00000552875 LRRIQ4A6NIV6 560 aa9.5□□□□□ -0.89
PRKCH-203ENST00000552875 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.5□□□□□ -0.89
PRKCH-203ENST00000552875 BCAT2O15382 392 aaPredicted RBP9.5□□□□□ -0.89
PRKCH-203ENST00000552875 KLK10O43240 276 aa9.5□□□□□ -0.89
PRKCH-203ENST00000552875 SUV39H1O43463 412 aa9.5□□□□□ -0.89
PRKCH-203ENST00000552875 PRC1O43663 620 aa9.5□□□□□ -0.89
PRKCH-203ENST00000552875 DGAT1O75907 488 aa9.5□□□□□ -0.89
PRKCH-203ENST00000552875 OAZ2O95190 189 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms