RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 NT5DC3Q86UY8 548 aa11.96□□□□□ -0.49
CACNB3-224ENST00000552812 C1orf131Q8NDD1 294 aaKnown RBP11.96□□□□□ -0.49
CACNB3-224ENST00000552812 OR6B3Q8NGW1 331 aa11.96□□□□□ -0.49
CACNB3-224ENST00000552812 KBTBD7Q8WVZ9 684 aa11.96□□□□□ -0.49
CACNB3-224ENST00000552812 OSBPL9Q96SU4 736 aa11.96□□□□□ -0.49
CACNB3-224ENST00000552812 CARD6Q9BX69 1037 aa11.96□□□□□ -0.49
CACNB3-224ENST00000552812 HIPK3Q9H422 1215 aa11.96□□□□□ -0.49
CACNB3-224ENST00000552812 MRPL47Q9HD33 250 aaKnown RBP11.96□□□□□ -0.49
CACNB3-224ENST00000552812 TMEM161AQ9NX61 479 aa11.96□□□□□ -0.49
CACNB3-224ENST00000552812 KANSL3Q9P2N6 904 aa11.96□□□□□ -0.49
CACNB3-224ENST00000552812 STRIP2Q9ULQ0 834 aa11.96□□□□□ -0.49
CACNB3-224ENST00000552812 SCINQ9Y6U3 715 aa11.96□□□□□ -0.49
CACNB3-224ENST00000552812 BHMG1C9JSJ3 638 aaPredicted RBP11.95□□□□□ -0.5
CACNB3-224ENST00000552812 CES2O00748 559 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 RRM1P23921 792 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 AARSP49588 968 aaKnown RBP eCLIP11.95□□□□□ -0.5
CACNB3-224ENST00000552812 CTCFP49711 727 aaPredicted RBP11.95□□□□□ -0.5
CACNB3-224ENST00000552812 LBX1P52954 281 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 CKAP4Q07065 602 aaKnown RBP11.95□□□□□ -0.5
CACNB3-224ENST00000552812 RPS6KA1Q15418 735 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 PLEKHA7Q6IQ23 1121 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 LCLAT1Q6UWP7 414 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 MMS22LQ6ZRQ5 1243 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 ADGRF2Q8IZF7 708 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 CRYBG2Q8N1P7 616 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 TMEM86AQ8N2M4 240 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 WDTC1Q8N5D0 677 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 MSANTD4Q8NCY6 345 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 DBF4BQ8NFT6 615 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 SPATA18Q8TC71 538 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 RSPH1Q8WYR4 309 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 C11orf70Q9BRQ4 267 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 SNX25Q9H3E2 840 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 RNF14Q9UBS8 474 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 AMFRQ9UKV5 643 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 L1RE1Q9UN81 338 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 STXBP5LQ9Y2K9 1186 aa11.95□□□□□ -0.5
CACNB3-224ENST00000552812 EFCAB8A8MWE9 144 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 A8MXQ7 604 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 CYB561D2O14569 222 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 MICAL2O94851 1124 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 KIF4AO95239 1232 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 POMCP01189 267 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 CXCL10P02778 98 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
CACNB3-224ENST00000552812 GNL1P36915 607 aaPredicted RBP11.94□□□□□ -0.5
CACNB3-224ENST00000552812 GSCP56915 257 aaPredicted RBP11.94□□□□□ -0.5
CACNB3-224ENST00000552812 TUBB4BP68371 445 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 TLE2Q04725 743 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 ORC1Q13415 861 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 TRIM60Q495X7 471 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 ARHGAP17Q68EM7 881 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 DENND1BQ6P3S1 775 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 ERICH1Q86X53 443 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 PDCL2Q8N4E4 241 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 URGCPQ8TCY9 931 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 HES6Q96HZ4 224 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 RPGRIP1Q96KN7 1286 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 TNIP3Q96KP6 325 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 PARVAQ9NVD7 372 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 LCMT1Q9UIC8 334 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 INPP5FQ9Y2H2 1132 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 FAM170AA1A519 330 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 CASTOR2A6NHX0 329 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 MIF4GDA9UHW6 222 aaKnown RBP11.94□□□□□ -0.5
CACNB3-224ENST00000552812 M0QYV0 167 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 GABRDO14764 452 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 NCK2O43639 380 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 SRGAP2O75044 1071 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 SETSIPP0DME0 302 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 GPD2P43304 727 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 TAP1Q03518 808 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 MAMLD1Q13495 774 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 NOMO2Q5JPE7 1267 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 ACOT1Q86TX2 421 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 CREG2Q8IUH2 290 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 SENP8Q96LD8 212 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 MIS12Q9H081 205 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 WNT8AQ9H1J5 351 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 GOLPH3Q9H4A6 298 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 WDR35Q9P2L0 1181 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 TSPAN16Q9UKR8 245 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 TBX21Q9UL17 535 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 NME7Q9Y5B8 376 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 ALG6Q9Y672 507 aa11.94□□□□□ -0.5
CACNB3-224ENST00000552812 TCRBV5S1A1TA0A578 114 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 ARHGEF37A1IGU5 675 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 CTAGE15A4D2H0 777 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 ENPP3O14638 875 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 TADA3O75528 432 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 CTAGE8P0CG41 777 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 FGFR1P11362 822 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 LHX1P48742 406 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 DSC1Q08554 894 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 PKDCCQ504Y2 493 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 CLLU1OSQ5K130 101 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 DCLRE1AQ6PJP8 1040 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 ZNF572Q7Z3I7 529 aaPredicted RBP11.93□□□□□ -0.5
CACNB3-224ENST00000552812 CTAGE6Q86UF2 777 aa11.93□□□□□ -0.5
CACNB3-224ENST00000552812 CTAGE4Q8IX94 777 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms