RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 IFNAR2P48551 515 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ACTR3P61158 418 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CTAG1AP78358 180 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 PPATQ06203 517 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 NSUN2Q08J23 767 aaKnown RBP eCLIP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 C19orf57Q0VDD7 668 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 GCKRQ14397 625 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 RRP1BQ14684 758 aaKnown RBP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 LPIN1Q14693 890 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 RASA2Q15283 850 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 SF3B3Q15393 1217 aaKnown RBP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CYP1B1Q16678 543 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 MAN2A1Q16706 1144 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ARL13BQ3SXY8 428 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 KIAA1755Q5JYT7 1200 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 TMEM63BQ5T3F8 832 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ANKRD40Q6AI12 368 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 GRAMD4Q6IC98 578 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CNNM4Q6P4Q7 775 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 MPRIPQ6WCQ1 1025 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 KYAT3Q6YP21 454 aaKnown RBP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 PPP1R21Q6ZMI0 780 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 RNF111Q6ZNA4 994 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 AGMOQ6ZNB7 445 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 LRRC55Q6ZSA7 311 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 HS2ST1Q7LGA3 356 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ZNF804AQ7Z570 1209 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 NET1Q7Z628 596 aaPredicted RBP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CLNKQ7Z7G1 428 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 NT5DC3Q86UY8 548 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 SATL1Q86VE3 508 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 VSIG1Q86XK7 387 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ERI1Q8IV48 349 aaKnown RBP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ZC3H3Q8IXZ2 948 aaKnown RBP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 PEX5LQ8IYB4 626 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 FAM186BQ8IYM0 893 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ZNF276Q8N554 614 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 METTL25Q8N6Q8 603 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 SPATA5Q8NB90 893 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 SLC7A3Q8WY07 619 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 STARD8Q92502 1023 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 MAML1Q92585 1016 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 APPBP2Q92624 585 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 TAF4BQ92750 862 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 SLCO2A1Q92959 643 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 ARHGEF2Q92974 986 aaKnown RBP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 EGLN2Q96KS0 407 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 LRRC37BQ96QE4 947 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CTRCQ99895 268 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 C7orf25Q9BPX7 421 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CCSER1Q9C0I3 900 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 TMEM60Q9H2L4 133 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 MAGEF1Q9HAY2 307 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 EPB41L4AQ9HCS5 686 aaPredicted RBP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 RIC8AQ9NPQ8 531 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 HOXC10Q9NYD6 342 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 CEP72Q9P209 647 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 PCYOX1Q9UHG3 505 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 AMACRQ9UHK6 382 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 DBR1Q9UK59 544 aaKnown RBP5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 STX8Q9UNK0 236 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 KCNJ14Q9UNX9 436 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 PLA2G4CQ9UP65 541 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 DMTF1Q9Y222 760 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 NR2E1Q9Y466 385 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 TIAM2Q8IVF5 1701 aa5.59□□□□□ -1.51
LSM3P2-201ENST00000551246 RIMS1Q86UR5 1692 aaKnown RBP5.59□□□□□ -1.52
LSM3P2-201ENST00000551246 TOPAZ1Q8N9V7 1692 aa5.59□□□□□ -1.52
LSM3P2-201ENST00000551246 NCANO14594 1321 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 A0A087X0T9 212 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 FUOMA2VDF0 154 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 TRIM64CA6NLI5 447 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 ERVV-2B6SEH9 535 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 GOLGA8TH3BQL2 631 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 KRIT1O00522 736 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 KCNK3O14649 394 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 LSM1O15116 133 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 PRPF4O43172 522 aaKnown RBP eCLIP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CYTH3O43739 400 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 MGEA5O60502 916 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 RSL1D1O76021 490 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 BAIAP3O94812 1187 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 PARNO95453 639 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CBX6O95503 412 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 OXSR1O95747 527 aaPredicted RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 FUCA1P04066 466 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 C8BP07358 591 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 FAM228BP0C875 321 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 GOLGA8HP0CJ92 632 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CYP2C9P11712 490 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 HSPA6P17066 643 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 XBP1P17861 261 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 VCLP18206 1134 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 NFKBIAP25963 317 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 CTNNA2P26232 953 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 PCSK6P29122 969 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 LONP1P36776 959 aaKnown RBP5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 BCAP31P51572 246 aa5.58□□□□□ -1.52
LSM3P2-201ENST00000551246 GPC3P51654 580 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms