RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 RUBCNQ92622 972 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.34□□□□□ -0.434e-7■■■□□ 16.7
TROAP-215ENST00000551245 C11orf70Q9BRQ4 267 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 LRRC1Q9BTT6 524 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 NT5C1AQ9BXI3 368 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 SLC38A7Q9NVC3 462 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 PARVAQ9NVD7 372 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 HMGXB4Q9UGU5 601 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.34□□□□□ -0.43
TROAP-215ENST00000551245 PTCH2Q9Y6C5 1203 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 PEX5P50542 639 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 HTRA3P83110 453 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
TROAP-215ENST00000551245 UBL4BQ8N7F7 174 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 C1orf131Q8NDD1 294 aaKnown RBP12.34□□□□□ -0.43
TROAP-215ENST00000551245 NOD1Q9Y239 953 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 FAM169AQ9Y6X4 670 aa12.34□□□□□ -0.43
TROAP-215ENST00000551245 PGRMC1O00264 195 aaKnown RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 O00370 1275 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 CD19P15391 556 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 CD52P31358 61 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 CTNNA1P35221 906 aaKnown RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 LIG3P49916 1009 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 TAP1Q03518 808 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 SOX4Q06945 474 aaPredicted RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 SV2CQ496J9 727 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 GLE1Q53GS7 698 aaKnown RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 SGO2Q562F6 1265 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 TRAF7Q6Q0C0 670 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 FAM43BQ6ZT52 329 aaPredicted RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 GSTCDQ8NEC7 633 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.33□□□□□ -0.44
TROAP-215ENST00000551245 YY1AP1Q9H869 796 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 EHD2Q9NZN4 543 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 CHORDC1Q9UHD1 332 aaPredicted RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 DMGDHQ9UI17 866 aaKnown RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 ANAPC7Q9UJX3 599 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 STRIP2Q9ULQ0 834 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 SNX9Q9Y5X1 595 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 FAM170AA1A519 330 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 KPNA7A9QM74 516 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 CEP104O60308 925 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 CAPN15O75808 1086 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 SKIP12755 728 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 SSTR3P32745 418 aaPredicted RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 MAN1A1P33908 653 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 TAF6P49848 677 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 MRPS25P82663 173 aaKnown RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 SOWAHAQ2M3V2 549 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 PPP1R15BQ5SWA1 713 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 DCAF12L1Q5VU92 463 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 TTC19Q6DKK2 380 aaPredicted RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 DPH6Q7L8W6 267 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 ERICH1Q86X53 443 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 MRPL45Q9BRJ2 306 aaKnown RBP12.33□□□□□ -0.44
TROAP-215ENST00000551245 OSBPL7Q9BZF2 842 aa12.33□□□□□ -0.44
TROAP-215ENST00000551245 A0A0U1RQF3 1178 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 ARVCFO00192 962 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 MICAL2O94851 1124 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 PROSCO94903 275 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 GABRB2P47870 512 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 GNGT1P63211 74 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 SLC7A5Q01650 507 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 ZNF618Q5T7W0 954 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 FEZF2Q8TBJ5 459 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 ALG3Q92685 438 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 HEXIM2Q96MH2 286 aaKnown RBP12.32□□□□□ -0.44
TROAP-215ENST00000551245 STARD7Q9NQZ5 370 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 SMARCAL1Q9NZC9 954 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 TRIM17Q9Y577 477 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 TDRD15B5MCY1 1934 aaKnown RBP12.32□□□□□ -0.44
TROAP-215ENST00000551245 TMEM191CA6NGB0 347 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 MYO1FO00160 1098 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 SPTLC1O15269 473 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 MGEA5O60502 916 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 GHRP10912 638 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 CKBP12277 381 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 CDK7P50613 346 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 DNA2P51530 1060 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 AGMOQ6ZNB7 445 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 CRYBG2Q8N1P7 616 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 TOP6BLQ8N6T0 577 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 C3orf20Q8ND61 904 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 BTBD6Q96KE9 485 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 UBN1Q9NPG3 1134 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 RBM12Q9NTZ6 932 aaKnown RBP12.32□□□□□ -0.44
TROAP-215ENST00000551245 WDR35Q9P2L0 1181 aa12.32□□□□□ -0.44
TROAP-215ENST00000551245 TMEM110-MUSTN1A8MSY1 372 aa12.31□□□□□ -0.44
TROAP-215ENST00000551245 KBTBD13C9JR72 458 aa12.31□□□□□ -0.44
TROAP-215ENST00000551245 GOLGA8KD6RF30 607 aa12.31□□□□□ -0.44
TROAP-215ENST00000551245 INPPL1O15357 1258 aa12.31□□□□□ -0.44
TROAP-215ENST00000551245 OPA1O60313 960 aa12.31□□□□□ -0.44
TROAP-215ENST00000551245 GPD2P43304 727 aa12.31□□□□□ -0.44
TROAP-215ENST00000551245 LILRA4P59901 499 aa12.31□□□□□ -0.44
TROAP-215ENST00000551245 PTPROQ16827 1216 aa12.31□□□□□ -0.44
TROAP-215ENST00000551245 ARHGAP17Q68EM7 881 aa12.31□□□□□ -0.44
TROAP-215ENST00000551245 SUGP1Q8IWZ8 645 aaKnown RBP12.31□□□□□ -0.44
TROAP-215ENST00000551245 KBTBD7Q8WVZ9 684 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms