RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ZDHHC8Q9ULC8 765 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 PCDHGB3Q9Y5G1 929 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 LRPPRCP42704 1394 aaKnown RBP6.27□□□□□ -1.41
CPSF6-206ENST00000550987 ARFGEF1Q9Y6D6 1849 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 AKAP12Q02952 1782 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 CLIP1P30622 1438 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 TLR5O60602 858 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 SKAP2O75563 359 aaPredicted RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 CSTBP04080 98 aaKnown RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 EEF1GP26641 437 aaKnown RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 FLT3LGP49771 235 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 DLG4P78352 724 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 PRR31Q5SQ13 230 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 AGBL4Q5VU57 503 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 LMBRD2Q68DH5 695 aaPredicted RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 MCTP2Q6DN12 878 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 TLDC1Q6P9B6 456 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 CNKSR3Q6P9H4 555 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 GPR155Q7Z3F1 870 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 PLXDC1Q8IUK5 500 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 LURAP1LQ8IV03 231 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 CMTM4Q8IZR5 234 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 SDR16C5Q8N3Y7 309 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 RNF152Q8N8N0 203 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 CCDC150Q8NCX0 1101 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 GIMAP8Q8ND71 665 aaPredicted RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 FNIP1Q8TF40 1166 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 NMD3Q96D46 503 aaKnown RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 SNX22Q96L94 193 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 SIGLEC10Q96LC7 697 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 PWWP2AQ96N64 755 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 MRI1Q9BV20 369 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 TTLL2Q9BWV7 592 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 KATNBL1Q9H079 304 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 AGO4Q9HCK5 861 aaKnown RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 GJB4Q9NTQ9 266 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 NTMQ9P121 344 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 COL20A1Q9P218 1284 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 ABT1Q9ULW3 272 aaKnown RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 LZTS1Q9Y250 596 aa6.26□□□□□ -1.41
CPSF6-206ENST00000550987 BRCA1P38398 1863 aaKnown RBP6.26□□□□□ -1.41
CPSF6-206ENST00000550987 RIMS2Q9UQ26 1411 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 TCRBV7S2A1N4TA0A589 114 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 GLTPD2A6NH11 291 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 MTSS1O43312 755 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 ANXA2P07355 339 aaKnown RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 GJB1P08034 283 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 ZNF888P0CJ79 500 aaPredicted RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 HSD3B1P14060 373 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 ALOX15P16050 662 aaPredicted RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 JUNBP17275 347 aaPredicted RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 FGFR2P21802 821 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 MAPK9P45984 424 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 ALDH9A1P49189 494 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 GZMKP49863 264 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 ADCY7P51828 1080 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 PSMC1P62191 440 aaKnown RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 IDI1Q13907 227 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 MPEG1Q2M385 716 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 GAGE13Q4V321 117 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 EMC10Q5UCC4 262 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 FBXO38Q6PIJ6 1188 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 CTU1Q7Z7A3 348 aaKnown RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 DCBLD1Q8N8Z6 715 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 FBXO15Q8NCQ5 510 aaPredicted RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 IL17RDQ8NFM7 739 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 NLGN4YQ8NFZ3 816 aaPredicted RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 ZSCAN18Q8TBC5 510 aaPredicted RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 IPCEF1Q8WWN9 437 aaPredicted RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 AJUBAQ96IF1 538 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 MYOCQ99972 504 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 SPATA25Q9BR10 227 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 STK31Q9BXU1 1019 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 ZNF518BQ9C0D4 1074 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 PRO3102Q9H379 93 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 JADE2Q9NQC1 790 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 TBC1D23Q9NUY8 699 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 C9orf78Q9NZ63 289 aaPredicted RBP6.25□□□□□ -1.41
CPSF6-206ENST00000550987 LRFN1Q9P244 771 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 MYO1AQ9UBC5 1043 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 SLC4A7Q9Y6M7 1214 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 MTUS2Q5JR59 1369 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 TRPM1Q7Z4N2 1603 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 CCDC144AA2RUR9 1427 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 CRB1P82279 1406 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 ERBINQ96RT1 1412 aa6.25□□□□□ -1.41
CPSF6-206ENST00000550987 GPR179Q6PRD1 2367 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 ZDBF2Q9HCK1 2354 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 CCDC18Q5T9S5 1454 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 A0A1W2PPC4 97 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 TRIM43BA6NCK2 446 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 HNRNPDLO14979 420 aaKnown RBP6.24□□□□□ -1.41
CPSF6-206ENST00000550987 ADAM23O75077 832 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 RASSF9O75901 435 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 MATN4O95460 622 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 MT-ND5P03915 603 aa6.24□□□□□ -1.41
CPSF6-206ENST00000550987 SBK3P0C264 359 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms