RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 ADCY1Q08828 1119 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 COL19A1Q14993 1142 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 NR1I3Q14994 352 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 SYCP1Q15431 976 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 LIN9Q5TKA1 542 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 KLHDC7AQ5VTJ3 777 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 RNF19BQ6ZMZ0 732 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 LRRTM3Q86VH5 581 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 B3GALNT2Q8NCR0 500 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 MYCBPAPQ8TBZ2 947 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 ARID3AQ99856 593 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 CLDND1Q9NY35 253 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 FBXW11Q9UKB1 542 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 GTF3C4Q9UKN8 822 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 PCDHB4Q9Y5E5 795 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 MYBPHLA2RUH7 354 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 PRRG1O14668 218 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 CBFA2T2O43439 604 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 TUFMP49411 452 aaKnown RBP22.84■■□□□ 1.25
NEK3-202ENST00000550841 EP400NLQ6ZTU2 488 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 SPATA2LQ8IUW3 424 aaPredicted RBP22.84■■□□□ 1.25
NEK3-202ENST00000550841 TCEAL8Q8IYN2 117 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 NEK11Q8NG66 645 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 TMEM176AQ96HP8 235 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 FUBP3Q96I24 572 aaKnown RBP eCLIP22.84■■□□□ 1.25
NEK3-202ENST00000550841 NAP1L5Q96NT1 182 aaPredicted RBP22.84■■□□□ 1.25
NEK3-202ENST00000550841 PKMYT1Q99640 499 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 CYP4F11Q9HBI6 524 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 ABCB6Q9NP58 842 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 SIX2Q9NPC8 291 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 MAN1C1Q9NR34 630 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 DNAJC12Q9UKB3 198 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 KIAA1257Q9ULG3 409 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 COG5Q9UP83 839 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 SIK3Q9Y2K2 1263 aa22.84■■□□□ 1.25
NEK3-202ENST00000550841 MTCL1Q9Y4B5 1905 aaKnown RBP22.84■■□□□ 1.25
NEK3-202ENST00000550841 A0A1W2PQC6 194 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 MTMR11A4FU01 709 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 ATP2C2O75185 946 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 SPATA31D3P0C874 917 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 PSMC1P62191 440 aaKnown RBP22.83■■□□□ 1.25
NEK3-202ENST00000550841 SPATA31D4Q6ZUB0 917 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 ACOT1Q86TX2 421 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 WHAMMQ8TF30 809 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 HEXIM2Q96MH2 286 aaKnown RBP22.83■■□□□ 1.25
NEK3-202ENST00000550841 KREMEN1Q96MU8 473 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 PGLYRP2Q96PD5 576 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 RBSNQ9H1K0 784 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 CRTAC1Q9NQ79 661 aa22.83■■□□□ 1.25
NEK3-202ENST00000550841 ATP8B3O60423 1300 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 LINC01565O15544 149 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 TEX33O43247 280 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 HCRTO43612 131 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 UCHL3P15374 230 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 TFF2Q03403 129 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 ARHGAP44Q17R89 818 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 ZNF394Q53GI3 561 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 MDH1BQ5I0G3 518 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 PPM1LQ5SGD2 360 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 DPY19L2P1Q6NXN4 242 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 ANKRD54Q6NXT1 300 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 TMEM270Q6UE05 265 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 UBR7Q8N806 425 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 ATAD1Q8NBU5 361 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 VN1R2Q8NFZ6 395 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 KAT5Q92993 513 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 HLA-CQ95604 372 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 ELOVL4Q9GZR5 314 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 DPEP3Q9H4B8 488 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 ZDHHC7Q9NXF8 308 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 IFNKQ9P0W0 207 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 NME7Q9Y5B8 376 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 TRANK1O15050 2925 aa22.82■■□□□ 1.24
NEK3-202ENST00000550841 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.81■■□□□ 1.24
NEK3-202ENST00000550841 ZMYND10O75800 440 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 GLP2RO95838 553 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 C8AP07357 584 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 PAEPP09466 180 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 HNRNPA1P09651 372 aaKnown RBP eCLIP22.81■■□□□ 1.24
NEK3-202ENST00000550841 BMP1P13497 986 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 ACO1P21399 889 aaKnown RBP22.81■■□□□ 1.24
NEK3-202ENST00000550841 HOXA9P31269 272 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 RAD23BP54727 409 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 CYP27A1Q02318 531 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 DUSP4Q13115 394 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 PLD1Q13393 1074 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 CFAP221Q4G0U5 840 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 GJB7Q6PEY0 223 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 CYP26C1Q6V0L0 522 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 GAS2L3Q86XJ1 694 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 STK33Q9BYT3 514 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 SFXN1Q9H9B4 322 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 FAM207AQ9NSI2 230 aaPredicted RBP22.81■■□□□ 1.24
NEK3-202ENST00000550841 TMLHEQ9NVH6 421 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 ABI2Q9NYB9 513 aaPredicted RBP22.81■■□□□ 1.24
NEK3-202ENST00000550841 CNTN6Q9UQ52 1028 aa22.81■■□□□ 1.24
NEK3-202ENST00000550841 SEC24AO95486 1093 aa22.8■■□□□ 1.24
NEK3-202ENST00000550841 KRT5P13647 590 aa22.8■■□□□ 1.24
NEK3-202ENST00000550841 ALDH1A3P47895 512 aa22.8■■□□□ 1.24
NEK3-202ENST00000550841 APBA1Q02410 837 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms