RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CYP2W1Q8TAV3 490 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 HAS1Q92839 578 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 ARMC5Q96C12 935 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 TRMT2BQ96GJ1 504 aaKnown RBP6.43□□□□□ -1.38
SCAF11-213ENST00000550629 BORCS6Q96GS4 357 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 SDF4Q9BRK5 362 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 IER2Q9BTL4 223 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 TRIM55Q9BYV6 548 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 RAB34Q9BZG1 259 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 TCEAL9Q9UHQ7 104 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 RCOR1Q9UKL0 485 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 PCDHB6Q9Y5E3 794 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 PCDHA2Q9Y5H9 948 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 X6R8D5 127 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 SMCHD1A6NHR9 2005 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 ELP1O95163 1332 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 ZSWIM8A7E2V4 1837 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 PLXNA1Q9UIW2 1896 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 HTTP42858 3142 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 FFAR3O14843 346 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 MARCH6O60337 910 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 GAS7O60861 476 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 PPP6R2O75170 966 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 PSMD10O75832 226 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 GH1P01241 217 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 ARP10275 920 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 ATP2B1P20020 1258 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 UBA1P22314 1058 aaKnown RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 LONP1P36776 959 aaKnown RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 JAK3P52333 1124 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 ARHGAP1Q07960 439 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 MAP4K2Q12851 820 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 ITGB3BPQ13352 177 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 PPP2R5CQ13362 524 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 SF3A1Q15459 793 aaKnown RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 ZNF174Q15697 407 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 TMEM266Q2M3C6 531 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 BRDTQ58F21 947 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 CELF3Q5SZQ8 465 aaKnown RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 MROH9Q5TGP6 573 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 LRCH2Q5VUJ6 765 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 B3GNT9Q6UX72 402 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 SEPT14Q6ZU15 432 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 DHX37Q8IY37 1157 aaKnown RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 CKAP2LQ8IYA6 745 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 Q8N1Y9 231 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 LINC01356Q8N9X3 169 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 LINC00301Q8NCQ3 95 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 TRPV1Q8NER1 839 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 PPTC7Q8NI37 304 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 FNIP1Q8TF40 1166 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 LEO1Q8WVC0 666 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 KCTD13Q8WZ19 329 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 TNPO1Q92973 898 aaKnown RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 TMEM169Q96HH4 297 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 SGSM3Q96HU1 749 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 AK8Q96MA6 479 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 USP28Q96RU2 1077 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 TEKT3Q9BXF9 490 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 UPF3AQ9H1J1 476 aaKnown RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 ZHX1Q9UKY1 873 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 PCDHA12Q9UN75 941 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 SRPRBQ9Y5M8 271 aaKnown RBP6.42□□□□□ -1.38
SCAF11-213ENST00000550629 NPFFR2Q9Y5X5 522 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 CLIC4Q9Y696 253 aa6.42□□□□□ -1.38
SCAF11-213ENST00000550629 ZNFX1Q9P2E3 1918 aaKnown RBP6.41□□□□□ -1.38
SCAF11-213ENST00000550629 SPTLC2O15270 562 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 DLX3O60479 287 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 KPNA6O60684 536 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 ATP9AO75110 1047 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 PPFIA4O75335 1185 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 ARIH2O95376 493 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 GGPS1O95749 300 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 RARBP10826 455 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 MUTP22033 750 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 ADCYAP1R1P41586 468 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 ME1P48163 572 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 CPT1AP50416 773 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 SP2Q02086 613 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 SPIRE1Q08AE8 756 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 HSP90AA2PQ14568 343 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-213ENST00000550629 STK38Q15208 465 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 LY6KQ17RY6 165 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 VWA3BQ502W6 1294 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 PRAMEF19Q5SWL8 479 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 FAM173BQ6P4H8 233 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 IGSF22Q8N9C0 903 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 ST13P5Q8NFI4 369 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-213ENST00000550629 NEK9Q8TD19 979 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 CPA5Q8WXQ8 436 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 SEC14L1Q92503 715 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 ZNF333Q96JL9 665 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 CHAMP1Q96JM3 812 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 SPATA33Q96N06 139 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 GBP4Q96PP9 640 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCAF11-213ENST00000550629 AP5M1Q9H0R1 490 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 TMEM60Q9H2L4 133 aa6.41□□□□□ -1.38
SCAF11-213ENST00000550629 TTC12Q9H892 705 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-213ENST00000550629 MLXIPQ9HAP2 919 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms