RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 JAG1P78504 1218 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 TNFAIP2Q03169 654 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 OCA2Q04671 838 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 ZDHHC24Q6UX98 284 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 LRRC55Q6ZSA7 311 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 GDF7Q7Z4P5 450 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 MAPKAPK5Q8IW41 473 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 YAF2Q8IY57 180 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 SYTL1Q8IYJ3 562 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 TXLNBQ8N3L3 684 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 PSD4Q8NDX1 1056 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 C20orf173Q96LM9 149 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 SLC46A1Q96NT5 459 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 ADOQ96SZ5 270 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 TTLL2Q9BWV7 592 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 AURKAIP1Q9NWT8 199 aaPredicted RBP5.88□□□□□ -1.47
LIMA1-205ENST00000550592 ZNF212Q9UDV6 495 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 CAPN11Q9UMQ6 739 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 SORCS3Q9UPU3 1222 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 RAD54BQ9Y620 910 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 AATKQ6ZMQ8 1374 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 PRDM2Q13029 1718 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 A0A087WV62 115 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 HNRNPDLO14979 420 aaKnown RBP5.87□□□□□ -1.47
LIMA1-205ENST00000550592 RASSF9O75901 435 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 SOAT2O75908 522 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 SUN1O94901 812 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 GPANK1O95872 356 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 A1BGP04217 495 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 ATXN1LP0C7T5 689 aaKnown RBP5.87□□□□□ -1.47
LIMA1-205ENST00000550592 SPATA31D3P0C874 917 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 KCNA2P16389 499 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 ACRV1P26436 265 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 IL1R2P27930 398 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 MAPK10P53779 464 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 HSD11B2P80365 405 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 CRHR2Q13324 411 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 ZRSR2Q15696 482 aaKnown RBP5.87□□□□□ -1.47
LIMA1-205ENST00000550592 RABL3Q5HYI8 236 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 TAF2Q6P1X5 1199 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 FOXR2Q6PJQ5 311 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 SLC30A10Q6XR72 485 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 SPATA31D4Q6ZUB0 917 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 TTLL10Q6ZVT0 673 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 TTC9BQ8N6N2 239 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 FANCBQ8NB91 859 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 RAPGEF4Q8WZA2 1011 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 ZNF566Q969W8 418 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 ZSWIM1Q9BR11 485 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 TEX101Q9BY14 249 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 DHX36Q9H2U1 1008 aaKnown RBP5.87□□□□□ -1.47
LIMA1-205ENST00000550592 DEF6Q9H4E7 631 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 PPCSQ9HAB8 311 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 TRPM5Q9NZQ8 1165 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 MID2Q9UJV3 735 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 MAN2B2Q9Y2E5 1009 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 TCAF1Q9Y4C2 921 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 CEP83Q9Y592 693 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 FPGT-TNNI3KV9GXZ4 949 aa5.87□□□□□ -1.47
LIMA1-205ENST00000550592 SPATA31A3Q5VYP0 1347 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 LOC102723971A0A1B0GUV8 181 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 A0A1W2PS29 197 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 CCP110O43303 1012 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 RPS6KA4O75676 772 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 INMTO95050 263 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 SCAF4O95104 1147 aaKnown RBP5.86□□□□□ -1.47
LIMA1-205ENST00000550592 FOSP01100 380 aaPredicted RBP5.86□□□□□ -1.47
LIMA1-205ENST00000550592 CFIP05156 583 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 TYRP1P17643 537 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 GCLCP48506 637 aaPredicted RBP5.86□□□□□ -1.47
LIMA1-205ENST00000550592 SELENOPP49908 381 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 ANXA11P50995 505 aaKnown RBP5.86□□□□□ -1.47
LIMA1-205ENST00000550592 TOB2Q14106 344 aaPredicted RBP5.86□□□□□ -1.47
LIMA1-205ENST00000550592 SLC29A2Q14542 456 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 NFIXQ14938 502 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 PRKD1Q15139 912 aaPredicted RBP5.86□□□□□ -1.47
LIMA1-205ENST00000550592 NPY5RQ15761 445 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 PLA1AQ53H76 456 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 B3GNTL1Q67FW5 361 aaPredicted RBP5.86□□□□□ -1.47
LIMA1-205ENST00000550592 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.86□□□□□ -1.47
LIMA1-205ENST00000550592 KRT28Q7Z3Y7 464 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 TMPRSS6Q8IU80 811 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 TMEM132CQ8N3T6 1108 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 CYP2W1Q8TAV3 490 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 CXorf38Q8TB03 319 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 LOXL4Q96JB6 756 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 PPP1R9BQ96SB3 815 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 HERPUD2Q9BSE4 406 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 BDH2Q9BUT1 245 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 SLC46A2Q9BY10 475 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 STK33Q9BYT3 514 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 TTYH3Q9C0H2 523 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 GOLGA2P5Q9HBQ8 144 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 TBC1D23Q9NUY8 699 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 ZSCAN32Q9NX65 697 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 RNF181Q9P0P0 153 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 RAPGEFL1Q9UHV5 662 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 ST6GALNAC2Q9UJ37 374 aa5.86□□□□□ -1.47
LIMA1-205ENST00000550592 KCNE5Q9UJ90 142 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms