RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ALDH1A3P47895 512 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 MCM2P49736 904 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 NRLP54845 237 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 LILRA4P59901 499 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 GTF2BQ00403 316 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 POU5F1Q01860 360 aaKnown RBP8.26□□□□□ -1.09
NEK3-201ENST00000550331 DMWDQ09019 674 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 SPEM2Q0P670 501 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 DUSP4Q13115 394 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 MTAPQ13126 283 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 COL9A2Q14055 689 aaPredicted RBP8.26□□□□□ -1.09
NEK3-201ENST00000550331 TEAD2Q15562 447 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 LPAL2Q16609 132 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 CENPPQ6IPU0 288 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 DSTYKQ6XUX3 929 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 BRAPQ7Z569 592 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 GPBP1Q86WP2 473 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 TMC8Q8IU68 726 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 MFSD6LQ8IWD5 586 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 MYCT1Q8N699 235 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 FAM3CQ92520 227 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 PGLYRP2Q96PD5 576 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 MSTO1Q9BUK6 570 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 LRRC3Q9BY71 257 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 DNAJC25Q9H1X3 360 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 CRISPLD1Q9H336 500 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 NDRG2Q9UN36 371 aaKnown RBP8.26□□□□□ -1.09
NEK3-201ENST00000550331 C2CD2Q9Y426 696 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 TIMM13Q9Y5L4 95 aaPredicted RBP8.26□□□□□ -1.09
NEK3-201ENST00000550331 F5P12259 2224 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 A0A1W2PRU2 124 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 ANO9A1A5B4 782 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 MTMR11A4FU01 709 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 HEPACAM2A8MVW5 462 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 PIRO00625 290 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 CHADO15335 359 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 TBCAO75347 108 aaKnown RBP8.25□□□□□ -1.09
NEK3-201ENST00000550331 ADH1CP00326 375 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 CYP11A1P05108 521 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 KRT18P05783 430 aaKnown RBP8.25□□□□□ -1.09
NEK3-201ENST00000550331 TDGF1P13385 188 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 CCR3P51677 355 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 FCHO2Q0JRZ9 810 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 NNTQ13423 1086 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 C9orf57Q5W0N0 161 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 JADE1Q6IE81 842 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 SLFN12LQ6IEE8 588 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 ARMCX5Q6P1M9 558 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 SLC39A4Q6P5W5 647 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 ITIH5Q86UX2 942 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 TMEM130Q8N3G9 435 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 RASSF8Q8NHQ8 419 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 CSGALNACT1Q8TDX6 532 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 LRRC15Q8TF66 581 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 RAD54LQ92698 747 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 PSMG2Q969U7 264 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 SENP8Q96LD8 212 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 FIZ1Q96SL8 496 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 ST6GALNAC4Q9H4F1 302 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 SLITRK6Q9H5Y7 841 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 ASB7Q9H672 318 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 C8orf33Q9H7E9 229 aaPredicted RBP8.25□□□□□ -1.09
NEK3-201ENST00000550331 LMAN1LQ9HAT1 526 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 BLOC1S4Q9NUP1 217 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 OBP2AQ9NY56 170 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 ANGPTL2Q9UKU9 493 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 DSEQ9UL01 958 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 SMC3Q9UQE7 1217 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.25□□□□□ -1.09
NEK3-201ENST00000550331 STYXL1Q9Y6J8 313 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 NOTCH4Q99466 2003 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 CEP295Q9C0D2 2601 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 NCANO14594 1321 aa8.25□□□□□ -1.09
NEK3-201ENST00000550331 COL4A2P08572 1712 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 SPAG17Q6Q759 2223 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 SDK1Q7Z5N4 2213 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 PAPSS2O95340 614 aaPredicted RBP8.24□□□□□ -1.09
NEK3-201ENST00000550331 NFICP08651 508 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 CHRNB1P11230 501 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 PLCG1P19174 1290 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 CCNE1P24864 410 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 WEE1P30291 646 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 MLLT3P42568 568 aaPredicted RBP8.24□□□□□ -1.09
NEK3-201ENST00000550331 TUFMP49411 452 aaKnown RBP8.24□□□□□ -1.09
NEK3-201ENST00000550331 GUCY2FP51841 1108 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 SMARCB1Q12824 385 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 LRRC32Q14392 662 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 DHX8Q14562 1220 aaKnown RBP8.24□□□□□ -1.09
NEK3-201ENST00000550331 MCM6Q14566 821 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 TMEM132DQ14C87 1099 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 VEPH1Q14D04 833 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 KARSQ15046 597 aaKnown RBP8.24□□□□□ -1.09
NEK3-201ENST00000550331 ARHGAP15Q53QZ3 475 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 LARP1BQ659C4 914 aaKnown RBP8.24□□□□□ -1.09
NEK3-201ENST00000550331 ADALQ6DHV7 355 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 LAIR1Q6GTX8 287 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 PRR23BQ6ZRT6 265 aa8.24□□□□□ -1.09
NEK3-201ENST00000550331 DNAJB7Q7Z6W7 309 aaPredicted RBP8.24□□□□□ -1.09
NEK3-201ENST00000550331 RALGPS2Q86X27 583 aaPredicted RBP8.24□□□□□ -1.09
NEK3-201ENST00000550331 METTL23Q86XA0 190 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms