RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 MAB21L3Q8N8X9 362 aa13.58□□□□□ -0.24
LETMD1-222ENST00000550274 SPPL2BQ8TCT7 592 aa13.58□□□□□ -0.24
LETMD1-222ENST00000550274 USP13Q92995 863 aaPredicted RBP13.58□□□□□ -0.24
LETMD1-222ENST00000550274 EBF3Q9H4W6 596 aa13.58□□□□□ -0.24
LETMD1-222ENST00000550274 AGO2Q9UKV8 859 aaKnown RBP13.58□□□□□ -0.24
LETMD1-222ENST00000550274 STYXL1Q9Y6J8 313 aa13.58□□□□□ -0.24
LETMD1-222ENST00000550274 KPNA7A9QM74 516 aa13.57□□□□□ -0.24
LETMD1-222ENST00000550274 ADSSP30520 456 aa13.57□□□□□ -0.24
LETMD1-222ENST00000550274 RUNX3Q13761 415 aa13.57□□□□□ -0.24
LETMD1-222ENST00000550274 SF3A2Q15428 464 aaKnown RBP13.57□□□□□ -0.24
LETMD1-222ENST00000550274 TMEM196Q5HYL7 178 aa13.57□□□□□ -0.24
LETMD1-222ENST00000550274 NAIF1Q69YI7 327 aaPredicted RBP13.57□□□□□ -0.24
LETMD1-222ENST00000550274 THEM5Q8N1Q8 247 aa13.57□□□□□ -0.24
LETMD1-222ENST00000550274 RASSF8Q8NHQ8 419 aa13.57□□□□□ -0.24
LETMD1-222ENST00000550274 C2orf15Q8WU43 125 aaKnown RBP13.57□□□□□ -0.24
LETMD1-222ENST00000550274 GAB3Q8WWW8 586 aa13.57□□□□□ -0.24
LETMD1-222ENST00000550274 LARP4BQ92615 738 aaKnown RBP13.57□□□□□ -0.24
LETMD1-222ENST00000550274 ST6GALNAC4Q9H4F1 302 aa13.57□□□□□ -0.24
LETMD1-222ENST00000550274 RXFP3Q9NSD7 469 aa13.57□□□□□ -0.24
LETMD1-222ENST00000550274 POLR3BQ9NW08 1133 aaPredicted RBP13.57□□□□□ -0.24
LETMD1-222ENST00000550274 THG1LQ9NWX6 298 aaKnown RBP13.57□□□□□ -0.24
LETMD1-222ENST00000550274 MYO18AQ92614 2054 aaKnown RBP13.56□□□□□ -0.24
LETMD1-222ENST00000550274 AXIN1O15169 862 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 TADA3O75528 432 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 PPP1R37O75864 691 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 EGFP01133 1207 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 ARSAP15289 507 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 ABCD1P33897 745 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 LONP1P36776 959 aaKnown RBP13.56□□□□□ -0.24
LETMD1-222ENST00000550274 AVPR1AP37288 418 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 KCNA1Q09470 495 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 SMARCB1Q12824 385 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 CCDC142Q17RM4 750 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 SV2CQ496J9 727 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 SDHAF4Q5VUM1 108 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 TXNDC8Q6A555 127 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 SCARA3Q6AZY7 606 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 SLFN12LQ6IEE8 588 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 USP49Q70CQ1 688 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 KBTBD6Q86V97 674 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 SFR1Q86XK3 245 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 ZSWIM2Q8NEG5 633 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 POMGNT1Q8WZA1 660 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 FAM84AQ96KN4 292 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 PI4K2AQ9BTU6 479 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 ARRDC1-AS1Q9H2J1 176 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 FBRSL1Q9HCM7 1045 aaKnown RBP13.56□□□□□ -0.24
LETMD1-222ENST00000550274 ZMYM5Q9UJ78 669 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 PCDHB5Q9Y5E4 795 aa13.56□□□□□ -0.24
LETMD1-222ENST00000550274 TNRC6BQ9UPQ9 1833 aaKnown RBP13.55□□□□□ -0.24
LETMD1-222ENST00000550274 CEP192Q8TEP8 1941 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 TRDMT1O14717 391 aaKnown RBP13.55□□□□□ -0.24
LETMD1-222ENST00000550274 RNF40O75150 1001 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 RPP40O75818 363 aaKnown RBP13.55□□□□□ -0.24
LETMD1-222ENST00000550274 EPN2O95208 641 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 DDX6P26196 483 aaKnown RBP eCLIP13.55□□□□□ -0.24
LETMD1-222ENST00000550274 POLR2BP30876 1174 aaKnown RBP13.55□□□□□ -0.24
LETMD1-222ENST00000550274 RAP1GAPP47736 663 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 GRSF1Q12849 480 aaKnown RBP eCLIP13.55□□□□□ -0.24
LETMD1-222ENST00000550274 BFSP1Q12934 665 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 PTPAQ15257 358 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 SF3A1Q15459 793 aaKnown RBP13.55□□□□□ -0.24
LETMD1-222ENST00000550274 AASDHQ4L235 1098 aaPredicted RBP13.55□□□□□ -0.24
LETMD1-222ENST00000550274 DYMQ7RTS9 669 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 ZNF720Q7Z2F6 126 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 DCP1BQ8IZD4 617 aaKnown RBP13.55□□□□□ -0.24
LETMD1-222ENST00000550274 PDCL2Q8N4E4 241 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 EPSTI1Q96J88 318 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 ZNF560Q96MR9 790 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 STRA6Q9BX79 667 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 TDP1Q9NUW8 608 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 MAGED2Q9UNF1 606 aaPredicted RBP13.55□□□□□ -0.24
LETMD1-222ENST00000550274 PI4KAP42356 2102 aa13.55□□□□□ -0.24
LETMD1-222ENST00000550274 CCDC163A0A0D9SF12 145 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 FOXD2O60548 495 aaPredicted RBP13.54□□□□□ -0.24
LETMD1-222ENST00000550274 PRPF40AO75400 957 aaKnown RBP13.54□□□□□ -0.24
LETMD1-222ENST00000550274 IL18RAPO95256 599 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 BMP15O95972 392 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 ITGB3P05106 788 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 ACAT1P24752 427 aaKnown RBP13.54□□□□□ -0.24
LETMD1-222ENST00000550274 CYP2F1P24903 491 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 DDIT3P35638 169 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 TFAMQ00059 246 aaKnown RBP13.54□□□□□ -0.24
LETMD1-222ENST00000550274 TSPY1Q01534 308 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 POU5F1Q01860 360 aaKnown RBP13.54□□□□□ -0.24
LETMD1-222ENST00000550274 DDR2Q16832 855 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 LARP1BQ659C4 914 aaKnown RBP13.54□□□□□ -0.24
LETMD1-222ENST00000550274 CACNA2D4Q7Z3S7 1137 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 MON1AQ86VX9 555 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 C1orf127Q8N9H9 656 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
LETMD1-222ENST00000550274 LEO1Q8WVC0 666 aaPredicted RBP13.54□□□□□ -0.24
LETMD1-222ENST00000550274 MRPS31Q92665 395 aaKnown RBP13.54□□□□□ -0.24
LETMD1-222ENST00000550274 EZH1Q92800 747 aaPredicted RBP13.54□□□□□ -0.24
LETMD1-222ENST00000550274 HVCN1Q96D96 273 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 SAAL1Q96ER3 474 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 HHIPQ96QV1 700 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 SLC22A12Q96S37 553 aa13.54□□□□□ -0.24
LETMD1-222ENST00000550274 PKMYT1Q99640 499 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms