RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 hCG_1818297A0A087WSY0 165 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 A0A087WZ62 844 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 C5orf60A6NFR6 353 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 TTLL13PA6NNM8 815 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 H3BRB1 525 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 DNALI1O14645 258 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 B4GALT5O43286 388 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 PEX10O60683 326 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 CILPO75339 1184 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 TOMM70O94826 608 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 CALCAP01258 141 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 SHBGP04278 402 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 ITGB3P05106 788 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 CFHP08603 1231 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 NFICP08651 508 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 TSHRP16473 764 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 ATP2A2P16615 1042 aaKnown RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 IVDP26440 423 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 KLRC2P26717 231 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 AXLP30530 894 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 PHBP35232 272 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 PCK1P35558 622 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 CDKN2BP42772 138 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 GABRB2P47870 512 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 RAD23BP54727 409 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 RPL7AP62424 266 aaKnown RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 INCA1Q0VD86 236 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 AUHQ13825 339 aaKnown RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 P3H1Q32P28 736 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 DUSP28Q4G0W2 176 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 TNFAIP8L3Q5GJ75 292 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 FAM47CQ5HY64 1035 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 JADE1Q6IE81 842 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 HIBCHQ6NVY1 386 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 DENND1BQ6P3S1 775 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 PPP1R21Q6ZMI0 780 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 ARHGEF18Q6ZSZ5 1173 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 CCDC121Q6ZUS5 278 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 BBS12Q6ZW61 710 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 CPNE8Q86YQ8 564 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 ZDHHC17Q8IUH5 632 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 CNPY4Q8N129 248 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 ALLCQ8N6M5 410 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 C1orf127Q8N9H9 656 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 TRAPPC12Q8WVT3 735 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 DYDC1Q8WWB3 177 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 TFAP2BQ92481 460 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 RAPGEF5Q92565 580 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 COPS5Q92905 334 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 HEXIM2Q96MH2 286 aaKnown RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 FDXACB1Q9BRP7 624 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 NT5C1AQ9BXI3 368 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 MAK16Q9BXY0 300 aaKnown RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 FRMD8Q9BZ67 464 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 TUT1Q9H6E5 874 aaKnown RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 EFCC1Q9HA90 598 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 RSAD1Q9HA92 442 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 UBN1Q9NPG3 1134 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 DPP3Q9NY33 737 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 NKIRAS1Q9NYS0 192 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 SAMD15Q9P1V8 674 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 LGALS13Q9UHV8 139 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 NEU2Q9Y3R4 380 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-209ENST00000550020 OTOFQ9HC10 1997 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 PTPRFP10586 1907 aa9.42□□□□□ -0.9
TMEM116-209ENST00000550020 WDR81Q562E7 1941 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 CCL15-CCL14A0A0B4J2E2 113 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 A0A1B0GUA9 196 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 SLC15A5A6NIM6 579 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 SMIM23A6NLE4 172 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 F8VP50 259 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 GOLGA8SH3BPF8 625 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 M0QYV0 167 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 SGK1O00141 431 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 GPR25O00155 361 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 TSPAN1O60635 241 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 ZNF189O75820 626 aaPredicted RBP9.41□□□□□ -0.9
TMEM116-209ENST00000550020 MICAL2O94851 1124 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 ACSL3O95573 720 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 CD4P01730 458 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 HOXD8P13378 290 aaPredicted RBP9.41□□□□□ -0.9
TMEM116-209ENST00000550020 CHN1P15882 459 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 ARF4P18085 180 aaPredicted RBP9.41□□□□□ -0.9
TMEM116-209ENST00000550020 STIP1P31948 543 aaKnown RBP9.41□□□□□ -0.9
TMEM116-209ENST00000550020 MAGEA4P43358 317 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 ARSEP51690 589 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 ITIH4Q14624 930 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 PDK2Q15119 407 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 RASA2Q15283 850 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 GRIK4Q16099 956 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 CCL15Q16663 113 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 AMHR2Q16671 573 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 C2CD6Q53TS8 623 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 KAZNQ674X7 775 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 LCLAT1Q6UWP7 414 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 MFSD7Q6UXD7 560 aa9.41□□□□□ -0.9
TMEM116-209ENST00000550020 C4orf22Q6V702 233 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms