RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 SETSIPP0DME0 302 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 TKTP29401 623 aaKnown RBP18.46■□□□□ 0.55
LETMD1-220ENST00000549686 CYP27A1Q02318 531 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 ORC1Q13415 861 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 MRPL58Q14197 206 aaKnown RBP18.46■□□□□ 0.55
LETMD1-220ENST00000549686 USP41Q3LFD5 358 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 INTS6LQ5JSJ4 861 aaKnown RBP18.46■□□□□ 0.55
LETMD1-220ENST00000549686 VARS2Q5ST30 1063 aaKnown RBP18.46■□□□□ 0.55
LETMD1-220ENST00000549686 ACAD10Q6JQN1 1059 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 RNF168Q8IYW5 571 aaPredicted RBP18.46■□□□□ 0.55
LETMD1-220ENST00000549686 CCAR2Q8N163 923 aaKnown RBP18.46■□□□□ 0.55
LETMD1-220ENST00000549686 MSANTD4Q8NCY6 345 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 ACRBPQ8NEB7 543 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 CYFIP2Q96F07 1278 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 TRIM11Q96F44 468 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 NOX5Q96PH1 765 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 PCDHB18PQ96TA0 734 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 HNRNPABQ99729 332 aaKnown RBP18.46■□□□□ 0.55
LETMD1-220ENST00000549686 GPR62Q9BZJ7 368 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 ISCUQ9H1K1 167 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 DPEP3Q9H4B8 488 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 PCDH10Q9P2E7 1040 aa18.46■□□□□ 0.55
LETMD1-220ENST00000549686 REXO2Q9Y3B8 237 aaKnown RBP18.46■□□□□ 0.55
LETMD1-220ENST00000549686 ZNF263O14978 683 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 MICAL2O94851 1124 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 SOD2P04179 222 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 H2AFZP0C0S5 128 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 UNGP13051 313 aaPredicted RBP18.45■□□□□ 0.54
LETMD1-220ENST00000549686 NSFP46459 744 aaKnown RBP18.45■□□□□ 0.54
LETMD1-220ENST00000549686 SLC8A3P57103 927 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 NOMO3P69849 1222 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 PLCB3Q01970 1234 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 CENPCQ03188 943 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 KRT17Q04695 432 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 SMARCB1Q12824 385 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 KIF5AQ12840 1032 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 H2AFVQ71UI9 128 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 DDX53Q86TM3 631 aaKnown RBP18.45■□□□□ 0.54
LETMD1-220ENST00000549686 TMEM173Q86WV6 379 aaPredicted RBP18.45■□□□□ 0.54
LETMD1-220ENST00000549686 DCP1BQ8IZD4 617 aaKnown RBP18.45■□□□□ 0.54
LETMD1-220ENST00000549686 MYCBPAPQ8TBZ2 947 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 VCPIP1Q96JH7 1222 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 GDF15Q99988 308 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 RTP3Q9BQQ7 232 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 ZSWIM1Q9BR11 485 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 HERC2P3Q9BVR0 1158 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 PLVAPQ9BX97 442 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 UBE2OQ9C0C9 1292 aaKnown RBP18.45■□□□□ 0.54
LETMD1-220ENST00000549686 MIS12Q9H081 205 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 TSPAN16Q9UKR8 245 aa18.45■□□□□ 0.54
LETMD1-220ENST00000549686 ANKRD62A6NC57 917 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 PJA2O43164 708 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 MYBL1P10243 752 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 ACAT1P24752 427 aaKnown RBP18.44■□□□□ 0.54
LETMD1-220ENST00000549686 PBX3P40426 434 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 BCAT1P54687 386 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 SNX16P57768 344 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 SHHQ15465 462 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 NFE2Q16621 373 aaPredicted RBP18.44■□□□□ 0.54
LETMD1-220ENST00000549686 C9orf50Q5SZB4 431 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 PPP1R26Q5T8A7 1209 aaPredicted RBP18.44■□□□□ 0.54
LETMD1-220ENST00000549686 FAM171BQ6P995 826 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 CEP57Q86XR8 500 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 PHF13Q86YI8 300 aaPredicted RBP18.44■□□□□ 0.54
LETMD1-220ENST00000549686 C12orf29Q8N999 325 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 ANKRD52Q8NB46 1076 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 BCL7CQ8WUZ0 217 aaPredicted RBP18.44■□□□□ 0.54
LETMD1-220ENST00000549686 CHST7Q9NS84 486 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 SSX2IPQ9Y2D8 614 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 BACE2Q9Y5Z0 518 aa18.44■□□□□ 0.54
LETMD1-220ENST00000549686 ESPNB1AK53 854 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 M0QYV0 167 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 KRT86O43790 486 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 CALCAP01258 141 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 FTLP02792 175 aaPredicted RBP18.43■□□□□ 0.54
LETMD1-220ENST00000549686 TMEM253P0C7T8 217 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 PSMC1P62191 440 aaKnown RBP18.43■□□□□ 0.54
LETMD1-220ENST00000549686 CREMQ03060 361 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 GOLGA7BQ2TAP0 167 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 CTXN3Q4LDR2 81 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 ARHGAP29Q52LW3 1261 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 MDH1BQ5I0G3 518 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 NAA35Q5VZE5 725 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 KIAA1841Q6NSI8 718 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 C4orf50Q6ZRC1 276 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 PALB2Q86YC2 1186 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 STK32AQ8WU08 396 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 CTNNBL1Q8WYA6 563 aaPredicted RBP18.43■□□□□ 0.54
LETMD1-220ENST00000549686 PIK3R5Q8WYR1 880 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 CALR3Q96L12 384 aaKnown RBP18.43■□□□□ 0.54
LETMD1-220ENST00000549686 SAMD11Q96NU1 681 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 ZCWPW1Q9H0M4 648 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 CRTAC1Q9NQ79 661 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 FAM49BQ9NUQ9 324 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 PCDHA11Q9Y5I1 949 aa18.43■□□□□ 0.54
LETMD1-220ENST00000549686 BTNL10A8MVZ5 291 aa18.42■□□□□ 0.54
LETMD1-220ENST00000549686 HCRTO43612 131 aa18.42■□□□□ 0.54
LETMD1-220ENST00000549686 CALB1P05937 261 aa18.42■□□□□ 0.54
LETMD1-220ENST00000549686 LINC00271P0C7V0 271 aa18.42■□□□□ 0.54
LETMD1-220ENST00000549686 BMP8BP34820 402 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms