RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 LACTBL1A8MY62 500 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 E9PMD0 336 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 PPEF2O14830 753 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 ZIC2O95409 532 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 F11P03951 625 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 ENGP17813 658 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 CYP3A5P20815 502 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 DDX6P26196 483 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 TNFSF9P41273 254 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 SEC13P55735 322 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 NLRP12P59046 1061 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 ARMCX6Q7L4S7 300 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 PDZD3Q86UT5 571 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 RASSF3Q86WH2 238 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 TMEFF1Q8IYR6 380 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 CHCHD4Q8N4Q1 142 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 NECAB1Q8N987 351 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 MDGA1Q8NFP4 955 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 RLN3Q8WXF3 142 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 DRC1Q96MC2 740 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 ZCWPW1Q9H0M4 648 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 TMEM74BQ9NUR3 256 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 DUS2Q9NX74 493 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 LRWD1Q9UFC0 647 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 EVLQ9UI08 416 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 GPSM3Q9Y4H4 160 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 ZFYVE26Q68DK2 2539 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 SDK1Q7Z5N4 2213 aa11.7□□□□□ -0.54
TRAFD1-206ENST00000549358 FREM2Q5SZK8 3169 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 FAM221BA6H8Z2 402 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 ANTXRLA6NF34 631 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 H0Y626 953 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 XPOTO43592 962 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 TRIM16O95361 564 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 CAPNS1P04632 268 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 CLTAP09496 248 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 HAPLN1P10915 354 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 HMGA1P17096 107 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 PTGER3P43115 390 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 PPP2R3AQ06190 1150 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 MCL1Q07820 350 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 MAPK7Q13164 816 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 SEMA3BQ13214 749 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 MTF1Q14872 753 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 LPCAT2Q7L5N7 544 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 PIP4P1Q86T03 277 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 LRRTM3Q86VH5 581 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 MON1AQ86VX9 555 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 CCDC33Q8N5R6 958 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 FRMD1Q8N878 549 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 CCDC26Q8TAB7 109 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 USP33Q8TEY7 942 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 OSCP1Q8WVF1 389 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 MRPS31Q92665 395 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 CNOT6LQ96LI5 555 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 CYP2S1Q96SQ9 504 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 NTPCRQ9BSD7 190 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 RUSC1Q9BVN2 902 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 HAPLN2Q9GZV7 340 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 FSCN3Q9NQT6 498 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 ABI2Q9NYB9 513 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 MBD1Q9UIS9 605 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 MAGED2Q9UNF1 606 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 DNM3Q9UQ16 869 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 WNT6Q9Y6F9 365 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 LOC400499M0QZD8 3231 aa11.69□□□□□ -0.54
TRAFD1-206ENST00000549358 IGF2RP11717 2491 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 K7EQS6 105 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 TNFRSF10BO14763 440 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 IFNAR2P48551 515 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 ATXN3P54252 364 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 FAM193AP78312 1265 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 RAD51AP2Q09MP3 1159 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 SCAPQ12770 1279 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 ZNF268Q14587 947 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 COL28A1Q2UY09 1125 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 RINT1Q6NUQ1 792 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 ZPBP2Q6X784 338 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 CENPQQ7L2Z9 268 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 METTL23Q86XA0 190 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 SYT12Q8IV01 421 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 THEM5Q8N1Q8 247 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 HDDC3Q8N4P3 179 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 STKLD1Q8NE28 680 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 SPPL2BQ8TCT7 592 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 C2orf15Q8WU43 125 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 ATP2A3Q93084 1043 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 FNBP1Q96RU3 617 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 GTPBP2Q9BX10 602 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 C17orf75Q9HAS0 396 aa11.68□□□□□ -0.54
TRAFD1-206ENST00000549358 ATXN2Q99700 1313 aaKnown RBP11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 CFIP05156 583 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 MAPTP10636 758 aaKnown RBP11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 GPR15P49685 360 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 PSEN1P49768 467 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 SMTNP53814 917 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 GUCY1B3Q02153 619 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 NR1H3Q13133 447 aa11.67□□□□□ -0.54
TRAFD1-206ENST00000549358 ENOX2Q16206 610 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms