RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 ACP6Q9NPH0 428 aa15.02■□□□□ -0
CACNB3-211ENST00000549226 CXXC1Q9P0U4 656 aaPredicted RBP15.02■□□□□ -0
CACNB3-211ENST00000549226 REXO2Q9Y3B8 237 aaKnown RBP15.02■□□□□ -0
CACNB3-211ENST00000549226 PCDHB12Q9Y5F1 795 aa15.02■□□□□ -0
CACNB3-211ENST00000549226 MRPL42Q9Y6G3 142 aaKnown RBP15.02■□□□□ -0
CACNB3-211ENST00000549226 A0A0A6YYK5 440 aaPredicted RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 KIF2AO00139 706 aaPredicted RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 ZNF500O60304 480 aaPredicted RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 EFEMP2O95967 443 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 TMEM253P0C7T8 217 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 PTPN1P18031 435 aaKnown RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 BCAT1P54687 386 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 NOMO3P69849 1222 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 PLCB3Q01970 1234 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 CYP27A1Q02318 531 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 IFI16Q16666 785 aaKnown RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 USP41Q3LFD5 358 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 INTS6LQ5JSJ4 861 aaKnown RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 FAM117BQ6P1L5 589 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 ANKS3Q6ZW76 656 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 PHF13Q86YI8 300 aaPredicted RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 DCP1BQ8IZD4 617 aaKnown RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 SLC39A11Q8N1S5 342 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 COLGALT1Q8NBJ5 622 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 MYCBPAPQ8TBZ2 947 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 STK32AQ8WU08 396 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 CTNNBL1Q8WYA6 563 aaPredicted RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 TFAP2BQ92481 460 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 RABGGTAQ92696 567 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 CLP1Q92989 425 aaKnown RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 PPP1R13BQ96KQ4 1090 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 PCDHB18PQ96TA0 734 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 HNRNPABQ99729 332 aaKnown RBP15.01□□□□□ -0.01
CACNB3-211ENST00000549226 TTPALQ9BTX7 342 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 CYLDQ9NQC7 956 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 SPG21Q9NZD8 308 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 MYO1AQ9UBC5 1043 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 TSPAN16Q9UKR8 245 aa15.01□□□□□ -0.01
CACNB3-211ENST00000549226 M0QYV0 167 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 TLL1O43897 1013 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 MICAL2O94851 1124 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 FTLP02792 175 aaPredicted RBP15□□□□□ -0.01
CACNB3-211ENST00000549226 CALB1P05937 261 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 PDGFRBP09619 1106 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 LMO2P25791 158 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 HOXD11P31277 338 aaPredicted RBP15□□□□□ -0.01
CACNB3-211ENST00000549226 MAGEA10P43363 369 aaPredicted RBP15□□□□□ -0.01
CACNB3-211ENST00000549226 CREMQ03060 361 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 MRPL58Q14197 206 aaKnown RBP15□□□□□ -0.01
CACNB3-211ENST00000549226 NFE2Q16621 373 aaPredicted RBP15□□□□□ -0.01
CACNB3-211ENST00000549226 VARS2Q5ST30 1063 aaKnown RBP15□□□□□ -0.01
CACNB3-211ENST00000549226 FAM171A1Q5VUB5 890 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 FAM171BQ6P995 826 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 C4orf50Q6ZRC1 276 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 RNF168Q8IYW5 571 aaPredicted RBP15□□□□□ -0.01
CACNB3-211ENST00000549226 RNF10Q8N5U6 811 aaKnown RBP15□□□□□ -0.01
CACNB3-211ENST00000549226 ANKRD52Q8NB46 1076 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 CYFIP2Q96F07 1278 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 HERC2P3Q9BVR0 1158 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 STRIP2Q9ULQ0 834 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 SSX2IPQ9Y2D8 614 aa15□□□□□ -0.01
CACNB3-211ENST00000549226 I3L4J1 428 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 SOD2P04179 222 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 IGFBP6P24592 240 aaPredicted RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 TKTP29401 623 aaKnown RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 GPC5P78333 572 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 KRT17Q04695 432 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 BST2Q10589 180 aaKnown RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 ORC1Q13415 861 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 TCEAL1Q15170 157 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 GOLGA7BQ2TAP0 167 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 PPP1R26Q5T8A7 1209 aaPredicted RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 LIN9Q5TKA1 542 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 NAA35Q5VZE5 725 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 DDX53Q86TM3 631 aaKnown RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 PALB2Q86YC2 1186 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 REXO1L1PQ8IX06 675 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 RHOT2Q8IXI1 618 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 IPO4Q8TEX9 1081 aaKnown RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 C2orf15Q8WU43 125 aaKnown RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 UBE2Q2Q8WVN8 375 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 FUBP3Q96I24 572 aaKnown RBP eCLIP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 RNPC3Q96LT9 517 aaKnown RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 SAMD11Q96NU1 681 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 RTP3Q9BQQ7 232 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 ZSWIM1Q9BR11 485 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 PLVAPQ9BX97 442 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 GPR62Q9BZJ7 368 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 DPEP3Q9H4B8 488 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 AVENQ9NQS1 362 aaPredicted RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 LCMT1Q9UIC8 334 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 GTF3C4Q9UKN8 822 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 NME7Q9Y5B8 376 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 TIMM13Q9Y5L4 95 aaPredicted RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 BACE2Q9Y5Z0 518 aa14.99□□□□□ -0.01
CACNB3-211ENST00000549226 FNDC1Q4ZHG4 1894 aaPredicted RBP14.99□□□□□ -0.01
CACNB3-211ENST00000549226 NCANO14594 1321 aa14.98□□□□□ -0.01
CACNB3-211ENST00000549226 F8W810 466 aa14.98□□□□□ -0.01
CACNB3-211ENST00000549226 KIF5CO60282 957 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms