RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 PRR11Q96HE9 360 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 MSTO1Q9BUK6 570 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 ZWILCHQ9H900 591 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 FBXO40Q9UH90 709 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 TRPC5Q9UL62 973 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 ATP2A1O14983 1001 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 SESN3P58005 492 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 SEPT7Q16181 437 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 EFHC2Q5JST6 749 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 NAIF1Q69YI7 327 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 VSIG10LQ86VR7 867 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 ASAP3Q8TDY4 903 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 GMLQ99445 158 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 PAFAH2Q99487 392 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 OSBPL1AQ9BXW6 950 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 SLC24A2Q9UI40 661 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 SHOC2Q9UQ13 582 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 DRG1Q9Y295 367 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 C2orf71A6NGG8 1288 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 PDHA1P08559 390 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 PTDSS1P48651 473 aaKnown RBP14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 EMC2Q15006 297 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 CTC1Q2NKJ3 1217 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 ZNF276Q8N554 614 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 ZNF526Q8TF50 670 aaPredicted RBP14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 CPT1BQ92523 772 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 PCDH9Q9HC56 1237 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 TTLL13PA6NNM8 815 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 ITGAVP06756 1048 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 PSAPP07602 524 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 ACTR2P61160 394 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 OTUD4Q01804 1114 aaKnown RBP14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 MTMR2Q13614 643 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 FYB2Q5VWT5 728 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 LRRC6Q86X45 466 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 FBXO36Q8NEA4 188 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 ACTL9Q8TC94 416 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 JPH1Q9HDC5 661 aaPredicted RBP14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 ZNF277Q9NRM2 450 aaPredicted RBP14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 RNF146Q9NTX7 359 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 TJP2Q9UDY2 1190 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 AGTPBP1Q9UPW5 1226 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 LRRC42Q9Y546 428 aa14.86□□□□□ -0.03
RAPGEF3-218ENST00000548919 TCRBV5S1A1TA0A578 114 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 CFAP69A5D8W1 941 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 C2CD2LO14523 706 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 ZWINTO95229 277 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 ITGBL1O95965 494 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 CCND2P30279 289 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 TNFSF9P41273 254 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 MCL1Q07820 350 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 BBS9Q3SYG4 887 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 KHDC1Q4VXA5 237 aaKnown RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 SLC45A4Q5BKX6 768 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 PAXIP1Q6ZW49 1069 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 WDTC1Q8N5D0 677 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 NKD2Q969F2 451 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 ATG4CQ96DT6 458 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 RPAP3Q9H6T3 665 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 ARL8BQ9NVJ2 186 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 PGAP2Q9UHJ9 254 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 ZNRF3Q9ULT6 936 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 CNTN6Q9UQ52 1028 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 CNTNAP2Q9UHC6 1331 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 K7ERI5 159 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 CD48P09326 243 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 PTPN4P29074 926 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 PCK1P35558 622 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 RASSF2P50749 326 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 ANO7Q6IWH7 933 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 GPAT2Q6NUI2 795 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 SCARA5Q6ZMJ2 495 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 SLC35B2Q8TB61 432 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 QTRT2Q9H974 415 aaKnown RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 FBXO6Q9NRD1 293 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 HEY2Q9UBP5 337 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 PCNTO95613 3336 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 KAT6AQ92794 2004 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 C3orf70A6NLC5 250 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 CST8O60676 142 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 TMEM63AO94886 807 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 WEE2P0C1S8 567 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 TBXAS1P24557 533 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 DSTYKQ6XUX3 929 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 APBB1IPQ7Z5R6 666 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 RDM1Q8NG50 284 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 DEPTORQ8TB45 409 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 MZB1Q8WU39 189 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 TFAP2BQ92481 460 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 CGRRF1Q99675 332 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 CADM1Q9BY67 442 aaKnown RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 YIPF3Q9GZM5 350 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 SLC9A2Q9UBY0 812 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 CORO1CQ9ULV4 474 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 STYXL1Q9Y6J8 313 aa14.85□□□□□ -0.03
RAPGEF3-218ENST00000548919 LINGO3P0C6S8 592 aa14.84□□□□□ -0.03
RAPGEF3-218ENST00000548919 MARK3P27448 753 aa14.84□□□□□ -0.03
RAPGEF3-218ENST00000548919 IL1R2P27930 398 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms