RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 DPEP3Q9H4B8 488 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 CA14Q9ULX7 337 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 NME7Q9Y5B8 376 aa16.89■□□□□ 0.29
DDX54-205ENST00000548786 ZFP37Q9Y6Q3 630 aaPredicted RBP16.89■□□□□ 0.29
DDX54-205ENST00000548786 MOSPD3O75425 235 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 WARSP23381 471 aaKnown RBP16.88■□□□□ 0.29
DDX54-205ENST00000548786 GNL1P36915 607 aaPredicted RBP16.88■□□□□ 0.29
DDX54-205ENST00000548786 AP3M2P53677 418 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 CDH8P55286 799 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 UBE2HP62256 183 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 CLDN10P78369 228 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 CYP27A1Q02318 531 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 NFE2Q16621 373 aaPredicted RBP16.88■□□□□ 0.29
DDX54-205ENST00000548786 NFIL3Q16649 462 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 DDR2Q16832 855 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 MDH1BQ5I0G3 518 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 FAM78AQ5JUQ0 283 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 ANKRD40Q6AI12 368 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 SPOPLQ6IQ16 392 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 INTS8Q75QN2 995 aaKnown RBP16.88■□□□□ 0.29
DDX54-205ENST00000548786 MTSS1LQ765P7 747 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 SV2AQ7L0J3 742 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 DPH6Q7L8W6 267 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 LIMS2Q7Z4I7 341 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 SCN4BQ8IWT1 228 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 ADSSL1Q8N142 457 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 SIX5Q8N196 739 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 C2orf15Q8WU43 125 aaKnown RBP16.88■□□□□ 0.29
DDX54-205ENST00000548786 PSMG2Q969U7 264 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 MYLPFQ96A32 169 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 PKMYT1Q99640 499 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 LRRC3Q9BY71 257 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 MFSD1Q9H3U5 465 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 CRTAC1Q9NQ79 661 aa16.88■□□□□ 0.29
DDX54-205ENST00000548786 AVENQ9NQS1 362 aaPredicted RBP16.88■□□□□ 0.29
DDX54-205ENST00000548786 MAGED2Q9UNF1 606 aaPredicted RBP16.88■□□□□ 0.29
DDX54-205ENST00000548786 CETN3O15182 167 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 HLA-DRAP01903 254 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 EPB41P11171 864 aaKnown RBP16.87■□□□□ 0.29
DDX54-205ENST00000548786 CD44P16070 742 aaKnown RBP16.87■□□□□ 0.29
DDX54-205ENST00000548786 GABRR2P28476 465 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 ATICP31939 592 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 CYP4F8P98187 520 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 PPP3CAQ08209 521 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 SMARCB1Q12824 385 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 ORC1Q13415 861 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 EDRF1Q3B7T1 1238 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 ZACNQ401N2 412 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 ZNF667Q5HYK9 610 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 TANGO2Q6ICL3 276 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 ITIH5Q86UX2 942 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 SUGP1Q8IWZ8 645 aaKnown RBP16.87■□□□□ 0.29
DDX54-205ENST00000548786 PLA2G2FQ9BZM2 168 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 SDCBP2Q9H190 292 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 ATXN3LQ9H3M9 355 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 GDE1Q9NZC3 331 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 CDH9Q9ULB4 789 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 HCN4Q9Y3Q4 1203 aa16.87■□□□□ 0.29
DDX54-205ENST00000548786 ZDBF2Q9HCK1 2354 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 A8MXQ7 604 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 SRFP11831 508 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 BMP6P22004 513 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 EPHA5P54756 1037 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 VCPP55072 806 aaKnown RBP16.86■□□□□ 0.29
DDX54-205ENST00000548786 GPC5P78333 572 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 STIM1Q13586 685 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 GRM2Q14416 872 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 DCAF17Q5H9S7 520 aaPredicted RBP16.86■□□□□ 0.29
DDX54-205ENST00000548786 GAREM2Q75VX8 874 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 FBXL6Q8N531 539 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 LEMD2Q8NC56 503 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 FLCNQ8NFG4 579 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 ZSCAN18Q8TBC5 510 aaPredicted RBP16.86■□□□□ 0.29
DDX54-205ENST00000548786 SPATA18Q8TC71 538 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 TAS1R2Q8TE23 839 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 NXPE3Q969Y0 559 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 HSFX1Q9UBD0 423 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 CTNND2Q9UQB3 1225 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 ASB3Q9Y575 518 aa16.86■□□□□ 0.29
DDX54-205ENST00000548786 WDFY4Q6ZS81 3184 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 STK25O00506 426 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 PSMA7O14818 248 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 MAPK13O15264 365 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 LRRN2O75325 713 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 TACC1O75410 805 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 STAU1O95793 577 aaKnown RBP16.85■□□□□ 0.29
DDX54-205ENST00000548786 BDNFP23560 247 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 FCARP24071 287 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 VIPR2P41587 438 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 GPR158Q5T848 1215 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 IER5LQ5T953 404 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 TCERG1LQ5VWI1 586 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 FAM171BQ6P995 826 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 PCED1BQ96HM7 432 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 MAGEC2Q9UBF1 373 aaPredicted RBP16.85■□□□□ 0.29
DDX54-205ENST00000548786 COL4A3Q01955 1670 aa16.85■□□□□ 0.29
DDX54-205ENST00000548786 IKBKBO14920 756 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 PTPN1P18031 435 aaKnown RBP16.84■□□□□ 0.29
DDX54-205ENST00000548786 RFX1P22670 979 aa16.84■□□□□ 0.29
DDX54-205ENST00000548786 STX17P56962 302 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms