RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 OR5B17Q8NGF7 314 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 CCDC127Q96BQ5 260 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 FUBP3Q96I24 572 aaKnown RBP eCLIP12.22□□□□□ -0.45
BEST3-209ENST00000548658 SEMA4AQ9H3S1 761 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 TASP1Q9H6P5 420 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 OBP2AQ9NY56 170 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 UXTQ9UBK9 157 aaPredicted RBP12.22□□□□□ -0.45
BEST3-209ENST00000548658 L1RE1Q9UN81 338 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 HPSEQ9Y251 543 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 ZDHHC9Q9Y397 364 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 FAM237AA0A1B0GTK4 181 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 A0A1W2PQ27 194 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 A0A1W2PQ64 194 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 A0A1W2PQD8 194 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 FAM170BA6NMN3 283 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 SOAT2O75908 522 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 DCNP07585 359 aaKnown RBP12.21□□□□□ -0.45
BEST3-209ENST00000548658 CSH1P0DML2 217 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 CSH2P0DML3 217 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 ATF6P18850 670 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 DDX6P26196 483 aaKnown RBP eCLIP12.21□□□□□ -0.45
BEST3-209ENST00000548658 CASP1P29466 404 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 GDI1P31150 447 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 VIPR2P41587 438 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 CYP24A1Q07973 514 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 TRPC3Q13507 836 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 UBXN2BQ14CS0 331 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 SOWAHAQ2M3V2 549 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 KMT5BQ4FZB7 885 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 CFAP221Q4G0U5 840 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 LMBRD2Q68DH5 695 aaPredicted RBP12.21□□□□□ -0.45
BEST3-209ENST00000548658 VITQ6UXI7 678 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 C4orf50Q6ZRC1 276 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 TPRG1Q6ZUI0 275 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 SPATA2LQ8IUW3 424 aaPredicted RBP12.21□□□□□ -0.45
BEST3-209ENST00000548658 ARID3BQ8IVW6 561 aaPredicted RBP12.21□□□□□ -0.45
BEST3-209ENST00000548658 C1orf210Q8IVY1 113 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 TTC9BQ8N6N2 239 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 MSANTD3Q96H12 275 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 CEP295NLQ96MC4 621 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 MMS19Q96T76 1030 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 CGRRF1Q99675 332 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 ZNF334Q9HCZ1 680 aaPredicted RBP12.21□□□□□ -0.45
BEST3-209ENST00000548658 DLGAP2Q9P1A6 1054 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 CDH9Q9ULB4 789 aa12.21□□□□□ -0.45
BEST3-209ENST00000548658 HEPACAM2A8MVW5 462 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 PDXKO00764 312 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 CHADO15335 359 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 KLRC4O43908 158 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 STAU1O95793 577 aaKnown RBP12.2□□□□□ -0.46
BEST3-209ENST00000548658 ATICP31939 592 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 FCHO2Q0JRZ9 810 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 STK4Q13043 487 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 GRM2Q14416 872 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 GPR158Q5T848 1215 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 FAM171BQ6P995 826 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 ZC3H14Q6PJT7 736 aaKnown RBP12.2□□□□□ -0.46
BEST3-209ENST00000548658 LIMS2Q7Z4I7 341 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 SLC9A9Q8IVB4 645 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 CSGALNACT1Q8TDX6 532 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 NKD2Q969F2 451 aaPredicted RBP12.2□□□□□ -0.46
BEST3-209ENST00000548658 SYAP1Q96A49 352 aaPredicted RBP12.2□□□□□ -0.46
BEST3-209ENST00000548658 PHOX2BQ99453 314 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 LPIN3Q9BQK8 851 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 PI4K2AQ9BTU6 479 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 FOXQ1Q9C009 403 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 LTB4R2Q9NPC1 389 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 HEBP1Q9NRV9 189 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 FAM86C1Q9NVL1 165 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 THG1LQ9NWX6 298 aaKnown RBP12.2□□□□□ -0.46
BEST3-209ENST00000548658 EHD2Q9NZN4 543 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 GTF3C4Q9UKN8 822 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 TSC2P49815 1807 aa12.2□□□□□ -0.46
BEST3-209ENST00000548658 PTPRJQ12913 1337 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 GFRA3O60609 400 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 PHACTR2O75167 634 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 TACC1O75410 805 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 RPN1P04843 607 aaKnown RBP12.19□□□□□ -0.46
BEST3-209ENST00000548658 WARSP23381 471 aaKnown RBP12.19□□□□□ -0.46
BEST3-209ENST00000548658 ACAT1P24752 427 aaKnown RBP12.19□□□□□ -0.46
BEST3-209ENST00000548658 GNL1P36915 607 aaPredicted RBP12.19□□□□□ -0.46
BEST3-209ENST00000548658 AVPR1AP37288 418 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 MAGEA11P43364 429 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 RPS9P46781 194 aaKnown RBP12.19□□□□□ -0.46
BEST3-209ENST00000548658 TNNC1P63316 161 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 CLDN10P78369 228 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 WDR72Q3MJ13 1102 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 ARHGAP29Q52LW3 1261 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 VSTM1Q6UX27 236 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 GRAMD1CQ8IYS0 662 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 CELF5Q8N6W0 485 aaKnown RBP12.19□□□□□ -0.46
BEST3-209ENST00000548658 FSIP1Q8NA03 581 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 GIPC2Q8TF65 315 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 MRPS31Q92665 395 aaKnown RBP12.19□□□□□ -0.46
BEST3-209ENST00000548658 CLDN23Q96B33 292 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 TRMT2BQ96GJ1 504 aaKnown RBP12.19□□□□□ -0.46
BEST3-209ENST00000548658 MYRFLQ96LU7 910 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 PKMYT1Q99640 499 aa12.19□□□□□ -0.46
BEST3-209ENST00000548658 IER2Q9BTL4 223 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms