RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TCEAL6Q6IPX3 200 aa17.76■□□□□ 0.43
SSH1-208ENST00000548522 METTL23Q86XA0 190 aa17.76■□□□□ 0.43
SSH1-208ENST00000548522 SPPL2BQ8TCT7 592 aa17.76■□□□□ 0.43
SSH1-208ENST00000548522 EZH1Q92800 747 aaPredicted RBP17.76■□□□□ 0.43
SSH1-208ENST00000548522 TCEAL3Q969E4 200 aa17.76■□□□□ 0.43
SSH1-208ENST00000548522 CALML4Q96GE6 196 aa17.76■□□□□ 0.43
SSH1-208ENST00000548522 PI4K2AQ9BTU6 479 aa17.76■□□□□ 0.43
SSH1-208ENST00000548522 ASB7Q9H672 318 aa17.76■□□□□ 0.43
SSH1-208ENST00000548522 AGO2Q9UKV8 859 aaKnown RBP17.76■□□□□ 0.43
SSH1-208ENST00000548522 MAGED2Q9UNF1 606 aaPredicted RBP17.76■□□□□ 0.43
SSH1-208ENST00000548522 H3BQV1 296 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 HCRTO43612 131 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 AVPR1AP37288 418 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 RAP1GAPP47736 663 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 KCNA1Q09470 495 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 GRSF1Q12849 480 aaKnown RBP eCLIP17.75■□□□□ 0.43
SSH1-208ENST00000548522 BFSP1Q12934 665 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 IL31Q6EBC2 164 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 THEM5Q8N1Q8 247 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 TMX3Q96JJ7 454 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 CCSER1Q9C0I3 900 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 KIF3AQ9Y496 699 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 STYXL1Q9Y6J8 313 aa17.75■□□□□ 0.43
SSH1-208ENST00000548522 WDFY3Q8IZQ1 3526 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 KPNA7A9QM74 516 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 TRDMT1O14717 391 aaKnown RBP17.74■□□□□ 0.43
SSH1-208ENST00000548522 TM4SF5O14894 197 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 CCDC192P0DO97 292 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 SCP2P22307 547 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 PAX3P23760 479 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 ACAT1P24752 427 aaKnown RBP17.74■□□□□ 0.43
SSH1-208ENST00000548522 DDR2Q16832 855 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 N4BP2L1Q5TBK1 243 aaPredicted RBP17.74■□□□□ 0.43
SSH1-208ENST00000548522 USP49Q70CQ1 688 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 CACNA2D4Q7Z3S7 1137 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 SFR1Q86XK3 245 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 PDCL2Q8N4E4 241 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 C12orf50Q8NA57 414 aaPredicted RBP17.74■□□□□ 0.43
SSH1-208ENST00000548522 TTC16Q8NEE8 873 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 C2orf15Q8WU43 125 aaKnown RBP17.74■□□□□ 0.43
SSH1-208ENST00000548522 SLC22A12Q96S37 553 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 TDP1Q9NUW8 608 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 L1RE1Q9UN81 338 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 SLC8A2Q9UPR5 921 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 PCDHB5Q9Y5E4 795 aa17.74■□□□□ 0.43
SSH1-208ENST00000548522 TULP1O00294 542 aaPredicted RBP17.73■□□□□ 0.43
SSH1-208ENST00000548522 DCLK1O15075 740 aa17.73■□□□□ 0.43
SSH1-208ENST00000548522 SLC26A4O43511 780 aa17.73■□□□□ 0.43
SSH1-208ENST00000548522 PRPF40AO75400 957 aaKnown RBP17.73■□□□□ 0.43
SSH1-208ENST00000548522 ZNF806P0C7X5 589 aa17.73■□□□□ 0.43
SSH1-208ENST00000548522 PMLP29590 882 aa17.73■□□□□ 0.43
SSH1-208ENST00000548522 POLR2BP30876 1174 aaKnown RBP17.73■□□□□ 0.43
SSH1-208ENST00000548522 LIMK1P53667 647 aa17.73■□□□□ 0.43
SSH1-208ENST00000548522 SV2CQ496J9 727 aa17.73■□□□□ 0.43
SSH1-208ENST00000548522 PLA2G2CQ5R387 149 aa17.73■□□□□ 0.43
SSH1-208ENST00000548522 STPG1Q5TH74 334 aa17.73■□□□□ 0.43
SSH1-208ENST00000548522 POMGNT1Q8WZA1 660 aa17.73■□□□□ 0.43
SSH1-208ENST00000548522 LARP4BQ92615 738 aaKnown RBP17.73■□□□□ 0.43
SSH1-208ENST00000548522 CHAMP1Q96JM3 812 aa17.73■□□□□ 0.43
SSH1-208ENST00000548522 ANTXRLA6NF34 631 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 FOXD2O60548 495 aaPredicted RBP17.72■□□□□ 0.43
SSH1-208ENST00000548522 PPP1R37O75864 691 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 ITGB3P05106 788 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 CYP2F1P24903 491 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 GJA4P35212 333 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 MPLP40238 635 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 GALK1P51570 392 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 TFAMQ00059 246 aaKnown RBP17.72■□□□□ 0.43
SSH1-208ENST00000548522 MTF1Q14872 753 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 DYMQ7RTS9 669 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 MON1AQ86VX9 555 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 OSTM1Q86WC4 334 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 DCP1BQ8IZD4 617 aaKnown RBP17.72■□□□□ 0.43
SSH1-208ENST00000548522 C1orf127Q8N9H9 656 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 RPLP0P6Q8NHW5 317 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 MRPS31Q92665 395 aaKnown RBP17.72■□□□□ 0.43
SSH1-208ENST00000548522 SAAL1Q96ER3 474 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 LOXL4Q96JB6 756 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 PKMYT1Q99640 499 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 P2RY13Q9BPV8 354 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 FAM213AQ9BRX8 229 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 ST6GALNAC4Q9H4F1 302 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 KIF9Q9HAQ2 790 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 TRPC7Q9HCX4 862 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 WNT6Q9Y6F9 365 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 RALGAPA1Q6GYQ0 2036 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 GREB1Q4ZG55 1949 aa17.72■□□□□ 0.43
SSH1-208ENST00000548522 OBSL1O75147 1896 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 SPEGQ15772 3267 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 ZZEF1O43149 2961 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 CCDC163A0A0D9SF12 145 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 DDX6P26196 483 aaKnown RBP eCLIP17.71■□□□□ 0.43
SSH1-208ENST00000548522 LONP1P36776 959 aaKnown RBP17.71■□□□□ 0.43
SSH1-208ENST00000548522 TSPY1Q01534 308 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 SMARCB1Q12824 385 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 PTPAQ15257 358 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 RABEP1Q15276 862 aa17.71■□□□□ 0.43
SSH1-208ENST00000548522 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
SSH1-208ENST00000548522 ZNF77Q15935 545 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms