RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 KCNQ3O43525 872 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 ZFPL1O95159 310 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 CFIP05156 583 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 XRCC6P12956 609 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTCH1-216ENST00000548379 KCNA2P16389 499 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 TYRP1P17643 537 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 EEF1GP26641 437 aaKnown RBP4.94□□□□□ -1.62
PTCH1-216ENST00000548379 TRAPPC10P48553 1259 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 SELENOPP49908 381 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 NPY5RQ15761 445 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 TUBB8Q3ZCM7 444 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 RABL3Q5HYI8 236 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 B3GNTL1Q67FW5 361 aaPredicted RBP4.94□□□□□ -1.62
PTCH1-216ENST00000548379 TAF2Q6P1X5 1199 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 ZDHHC24Q6UX98 284 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 BEND5Q7L4P6 421 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 KRT28Q7Z3Y7 464 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 GDF7Q7Z4P5 450 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 MAPKAPK5Q8IW41 473 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 FANCBQ8NB91 859 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 VPS37AQ8NEZ2 397 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 FUBP1Q96AE4 644 aaKnown RBP4.94□□□□□ -1.62
PTCH1-216ENST00000548379 SLC46A1Q96NT5 459 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 MOGAT1Q96PD6 335 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 ADOQ96SZ5 270 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 SLC46A2Q9BY10 475 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 EIF2AQ9BY44 585 aaKnown RBP4.94□□□□□ -1.62
PTCH1-216ENST00000548379 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 STK33Q9BYT3 514 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 MS4A7Q9GZW8 240 aaPredicted RBP4.94□□□□□ -1.62
PTCH1-216ENST00000548379 GJB4Q9NTQ9 266 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 AURKAIP1Q9NWT8 199 aaPredicted RBP4.94□□□□□ -1.62
PTCH1-216ENST00000548379 DKK2Q9UBU2 259 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 KCNE5Q9UJ90 142 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 CDC23Q9UJX2 597 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 TESMINQ9Y4I5 508 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 FHAD1B1AJZ9 1412 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 CHD1O14646 1710 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 SPATA31A3Q5VYP0 1347 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 GRIN2AQ12879 1464 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 AATKQ6ZMQ8 1374 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 CUX1P39880 1505 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 ABCA10Q8WWZ4 1543 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 GAGE12BA1L429 117 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 GAGE12HA6NDE8 117 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 PLSCR1O15162 318 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 CCP110O43303 1012 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 RPS6KA4O75676 772 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 SOAT2O75908 522 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 ATXN1LP0C7T5 689 aaKnown RBP4.93□□□□□ -1.62
PTCH1-216ENST00000548379 BTF3P20290 206 aaKnown RBP4.93□□□□□ -1.62
PTCH1-216ENST00000548379 ZFP36P26651 326 aaKnown RBP4.93□□□□□ -1.62
PTCH1-216ENST00000548379 IL1R2P27930 398 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 TECP42680 631 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 HSD11B2P80365 405 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 TNFAIP2Q03169 654 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 CNGB1Q14028 1251 aaPredicted RBP4.93□□□□□ -1.62
PTCH1-216ENST00000548379 NFIXQ14938 502 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 IQCB1Q15051 598 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 FCRL6Q6DN72 434 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 RNF44Q7L0R7 432 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 TMEM132CQ8N3T6 1108 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 NSUN7Q8NE18 718 aaKnown RBP4.93□□□□□ -1.62
PTCH1-216ENST00000548379 PRG4Q92954 1404 aaPredicted RBP4.93□□□□□ -1.62
PTCH1-216ENST00000548379 BOD1Q96IK1 185 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 ZSWIM1Q9BR11 485 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 BDH2Q9BUT1 245 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 STK31Q9BXU1 1019 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 ZNF703Q9H7S9 590 aaPredicted RBP4.93□□□□□ -1.62
PTCH1-216ENST00000548379 TMEM74BQ9NUR3 256 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 ZNF212Q9UDV6 495 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 EIF2B4Q9UI10 523 aaKnown RBP4.93□□□□□ -1.62
PTCH1-216ENST00000548379 MID2Q9UJV3 735 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 SORCS3Q9UPU3 1222 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 LRCH1Q9Y2L9 728 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 FPGT-TNNI3KV9GXZ4 949 aa4.93□□□□□ -1.62
PTCH1-216ENST00000548379 NUP160Q12769 1436 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 LOC102723971A0A1B0GUV8 181 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 VPS4BO75351 444 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 GPANK1O95872 356 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 SPATA31D3P0C874 917 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 MYL4P12829 197 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 ACVR2AP27037 513 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 GABRB3P28472 473 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 GCLCP48506 637 aaPredicted RBP4.92□□□□□ -1.62
PTCH1-216ENST00000548379 ANXA11P50995 505 aaKnown RBP4.92□□□□□ -1.62
PTCH1-216ENST00000548379 ZNF134P52741 427 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 LOXL3P58215 753 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 FAM189BP81408 668 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 MC2RQ01718 297 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 PRKD1Q15139 912 aaPredicted RBP4.92□□□□□ -1.62
PTCH1-216ENST00000548379 ZIK1Q3SY52 487 aaPredicted RBP4.92□□□□□ -1.62
PTCH1-216ENST00000548379 INO80DQ53TQ3 878 aaPredicted RBP4.92□□□□□ -1.62
PTCH1-216ENST00000548379 SPATA31D4Q6ZUB0 917 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 MYLK4Q86YV6 388 aaPredicted RBP4.92□□□□□ -1.62
PTCH1-216ENST00000548379 YAF2Q8IY57 180 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 MPP5Q8N3R9 675 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 FAM109AQ8N4B1 249 aa4.92□□□□□ -1.62
PTCH1-216ENST00000548379 NKAPQ8N5F7 415 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms