RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 NMD3Q96D46 503 aaKnown RBP5.16□□□□□ -1.58
DEPDC4-205ENST00000548313 BTBD1Q9H0C5 482 aa5.16□□□□□ -1.58
DEPDC4-205ENST00000548313 SMURF2Q9HAU4 748 aa5.16□□□□□ -1.58
DEPDC4-205ENST00000548313 CASS4Q9NQ75 786 aa5.16□□□□□ -1.58
DEPDC4-205ENST00000548313 MRPS18AQ9NVS2 196 aaKnown RBP5.16□□□□□ -1.58
DEPDC4-205ENST00000548313 SYBUQ9NX95 663 aa5.16□□□□□ -1.58
DEPDC4-205ENST00000548313 RGS17Q9UGC6 210 aaPredicted RBP5.16□□□□□ -1.58
DEPDC4-205ENST00000548313 MAST3O60307 1309 aa5.16□□□□□ -1.58
DEPDC4-205ENST00000548313 PROM1O43490 865 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 BRAFP15056 766 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 UCP3P55916 312 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 TBX4P57082 545 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 LOXL3P58215 753 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 MC2RQ01718 297 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 FMO1Q01740 532 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 CTBP1Q13363 440 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 SAFBQ15424 915 aaKnown RBP eCLIP5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 LAIR1Q6GTX8 287 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 LAYNQ6UX15 382 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 ZNF627Q7L945 461 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 CCAR1Q8IX12 1150 aaKnown RBP5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 SLC15A4Q8N697 577 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 DNAJC5GQ8N7S2 189 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 SUPT20HQ8NEM7 779 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 LINC00476Q8WZB0 136 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 SLC9A6Q92581 669 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 SLC46A1Q96NT5 459 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 IKZF4Q9H2S9 585 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 ZNF287Q9HBT7 754 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 A1CFQ9NQ94 594 aaKnown RBP5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 AFF4Q9UHB7 1163 aaKnown RBP5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 OGDHLQ9ULD0 1010 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 SHOC2Q9UQ13 582 aa5.15□□□□□ -1.59
DEPDC4-205ENST00000548313 TRIM43BA6NCK2 446 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 FOXN1O15353 648 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 PPFIA2O75334 1257 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 RHOBTB3O94955 611 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 MYL1P05976 194 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 INHBCP55103 352 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 NXPH1P58417 271 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 ITIH3Q06033 890 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 BOP1Q14137 746 aaKnown RBP5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 COBLL1Q53SF7 1204 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 VWA1Q6PCB0 445 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 Q6YL49 198 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 Q6ZPA2 131 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 GAS2L3Q86XJ1 694 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 VRK3Q8IV63 474 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 PJA1Q8NG27 643 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 SSH3Q8TE77 659 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 PHKBQ93100 1093 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 TRIM43Q96BQ3 446 aaPredicted RBP5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 PGBD1Q96JS3 809 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 MSLNLQ96KJ4 702 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 Q96MF0 132 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 STRBPQ96SI9 672 aaKnown RBP5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 MESP1Q9BRJ9 268 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 AIFM2Q9BRQ8 373 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 PTDSS2Q9BVG9 487 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 SMOC2Q9H3U7 446 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 TOR3AQ9H497 397 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 ZSCAN32Q9NX65 697 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 KCTD5Q9NXV2 234 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 CPNE7Q9UBL6 633 aa5.14□□□□□ -1.59
DEPDC4-205ENST00000548313 ANO9A1A5B4 782 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 GRID2IPA4D2P6 1211 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 DCLK1O15075 740 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 ESRRBO95718 433 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 MAP4K4O95819 1239 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 CD6P30203 668 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 LRPAP1P30533 357 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 PXNP49023 591 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 NANOS3P60323 173 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 MPP3Q13368 585 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 SF3B3Q15393 1217 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 NBPF8Q3BBV2 869 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 TMEM108Q6UXF1 575 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 Q6ZNX1 250 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 MRGPRGQ86SM5 289 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 MICU3Q86XE3 530 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 FAM109AQ8N4B1 249 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 SLC30A5Q8TAD4 765 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 FBXO41Q8TF61 875 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 CAVIN3Q969G5 261 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 UNKQ9C0B0 810 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 AMBRA1Q9C0C7 1298 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 TTYH3Q9C0H2 523 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 ARNT2Q9HBZ2 717 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 SACM1LQ9NTJ5 587 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 PACSIN3Q9UKS6 424 aa5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 EPN1Q9Y6I3 576 aaPredicted RBP5.13□□□□□ -1.59
DEPDC4-205ENST00000548313 A0A087X1B8 175 aa5.12□□□□□ -1.59
DEPDC4-205ENST00000548313 MBD3L4A6NDZ8 208 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-205ENST00000548313 MBD3L3A6NE82 208 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-205ENST00000548313 PEX1O43933 1283 aa5.12□□□□□ -1.59
DEPDC4-205ENST00000548313 PQBP1O60828 265 aaKnown RBP5.12□□□□□ -1.59
DEPDC4-205ENST00000548313 GCP02774 474 aa5.12□□□□□ -1.59
DEPDC4-205ENST00000548313 ZKSCAN1P17029 563 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-205ENST00000548313 KRT4P19013 534 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms