RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ARL5CA6NH57 179 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 CYB561D2O14569 222 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 PEX5P50542 639 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 COPS2P61201 443 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 PSMC1P62191 440 aaKnown RBP14.21□□□□□ -0.13
PTCH1-215ENST00000547672 RBM10P98175 930 aaKnown RBP14.21□□□□□ -0.13
PTCH1-215ENST00000547672 CAP1Q01518 475 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 GRIK3Q13003 919 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 GPS2Q13227 327 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 SOWAHAQ2M3V2 549 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 GLRA4Q5JXX5 417 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 ZNF618Q5T7W0 954 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 SLC24A5Q71RS6 500 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 RCOR2Q8IZ40 523 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 NIPA2Q8N8Q9 360 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 URGCPQ8TCY9 931 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 MS4A14Q96JA4 679 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 AGO3Q9H9G7 860 aaKnown RBP14.21□□□□□ -0.13
PTCH1-215ENST00000547672 RGS18Q9NS28 235 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 TRMT13Q9NUP7 481 aaKnown RBP14.21□□□□□ -0.13
PTCH1-215ENST00000547672 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTCH1-215ENST00000547672 PTPN22Q9Y2R2 807 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 THSD7BQ9C0I4 1608 aa14.21□□□□□ -0.13
PTCH1-215ENST00000547672 PDCD11Q14690 1871 aaKnown RBP14.21□□□□□ -0.14
PTCH1-215ENST00000547672 INPPL1O15357 1258 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 ATMINO43313 823 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-215ENST00000547672 RNF8O76064 485 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 ZRANB2O95218 330 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTCH1-215ENST00000547672 FGGP02679 453 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 SELPP16109 830 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 GBP1P32455 592 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 SCNN1AP37088 669 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 GPD2P43304 727 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 CDK7P50613 346 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 BCAT1P54687 386 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 C2orf54Q08AI8 447 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 FBXO38Q6PIJ6 1188 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 GLB1LQ6UWU2 654 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 DSTYKQ6XUX3 929 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 ADGRF2Q8IZF7 708 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 WDTC1Q8N5D0 677 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 ANKRD52Q8NB46 1076 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 APBB2Q92870 758 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 WNT8BQ93098 351 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 RBM41Q96IZ5 413 aaKnown RBP14.2□□□□□ -0.14
PTCH1-215ENST00000547672 GAD1Q99259 594 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 GOLPH3Q9H4A6 298 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 RBM12Q9NTZ6 932 aaKnown RBP14.2□□□□□ -0.14
PTCH1-215ENST00000547672 ASNSD1Q9NWL6 643 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 STIM2Q9P246 746 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 RASAL2Q9UJF2 1139 aa14.2□□□□□ -0.14
PTCH1-215ENST00000547672 FAM187AA6NFU0 413 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 PITPNM1O00562 1244 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 PTGESO14684 152 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 CALCAP01258 141 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 CFHP08603 1231 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 KRT7P08729 469 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 TNFRSF8P28908 595 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 PCSK1P29120 753 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 CHRNA3P32297 505 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 MLH1P40692 756 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 SSR1P43307 286 aaKnown RBP14.19□□□□□ -0.14
PTCH1-215ENST00000547672 CLCN6P51797 869 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 FAM189BP81408 668 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 BST2Q10589 180 aaKnown RBP14.19□□□□□ -0.14
PTCH1-215ENST00000547672 PDCLQ13371 301 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 TUSC3Q13454 348 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 DHX34Q14147 1143 aaKnown RBP14.19□□□□□ -0.14
PTCH1-215ENST00000547672 SCARA3Q6AZY7 606 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 DCLRE1AQ6PJP8 1040 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 CCNI2Q6ZMN8 369 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-215ENST00000547672 AGMOQ6ZNB7 445 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 HDXQ7Z353 690 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 POLNQ7Z5Q5 900 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 ACOT1Q86TX2 421 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 ECHDC2Q86YB7 292 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 KATNAL2Q8IYT4 538 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 EXD1Q8NHP7 514 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 MCRS1Q96EZ8 462 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 PKNOX2Q96KN3 472 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 HSFY1Q96LI6 401 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 MRPL45Q9BRJ2 306 aaKnown RBP14.19□□□□□ -0.14
PTCH1-215ENST00000547672 RAB17Q9H0T7 212 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 TRPV6Q9H1D0 765 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 ELAC1Q9H777 363 aaKnown RBP14.19□□□□□ -0.14
PTCH1-215ENST00000547672 TSPAN16Q9UKR8 245 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 TRIP11Q15643 1979 aa14.19□□□□□ -0.14
PTCH1-215ENST00000547672 TCRBV5S1A1TA0A578 114 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 PODXLO00592 558 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 HOXA2O43364 376 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 ODC1P11926 461 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 LMNB2Q03252 620 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 CUL1Q13616 776 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 MAPRE1Q15691 268 aaKnown RBP14.18□□□□□ -0.14
PTCH1-215ENST00000547672 GOLGA7BQ2TAP0 167 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 PPP1R15BQ5SWA1 713 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 CC2D1AQ6P1N0 951 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-215ENST00000547672 LRRC8DQ7L1W4 858 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 ARCQ7LC44 396 aa14.18□□□□□ -0.14
PTCH1-215ENST00000547672 TMEM110Q86TL2 294 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms