RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TUBB8Q3ZCM7 444 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 MUM1L1Q5H9M0 696 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 HYIQ5T013 277 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 TLDC1Q6P9B6 456 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 RSRC2Q7L4I2 434 aaKnown RBP5.03□□□□□ -1.6
SCAF11-210ENST00000547654 ANKRD18AQ8IVF6 992 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 FAM9BQ8IZU0 186 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 PRR18Q8N4B5 295 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 FAM98AQ8NCA5 519 aaKnown RBP5.03□□□□□ -1.6
SCAF11-210ENST00000547654 CASKIN2Q8WXE0 1202 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 DMRTA2Q96SC8 542 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 ACE2Q9BYF1 805 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-210ENST00000547654 LRRC27Q9C0I9 530 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 BTBD1Q9H0C5 482 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 CDC23Q9UJX2 597 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 PADI4Q9UM07 663 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 MAGED2Q9UNF1 606 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-210ENST00000547654 STXBP5LQ9Y2K9 1186 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 RIMBP3CA6NJZ7 1639 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 RIMBP3BA6NNM3 1639 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 RIMBP3Q9UFD9 1639 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 ERCC6Q03468 1493 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 FOXN3O00409 490 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-210ENST00000547654 AKR1B10O60218 316 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 RNASEH2AO75792 299 aaKnown RBP5.02□□□□□ -1.61
SCAF11-210ENST00000547654 EGR2P11161 476 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-210ENST00000547654 TECP42680 631 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 AGFG1P52594 562 aaKnown RBP5.02□□□□□ -1.61
SCAF11-210ENST00000547654 CLRN1P58418 232 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 CCDC38Q502W7 563 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 IZUMO3Q5VZ72 239 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 AFMIDQ63HM1 303 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 B3GNTL1Q67FW5 361 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-210ENST00000547654 LVRNQ6Q4G3 990 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 SEM1Q6ZVN7 128 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 MAEAQ7L5Y9 396 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 DCBLD1Q8N8Z6 715 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 ZFP28Q8NHY6 868 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 KIAA1191Q96A73 305 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 MTFMTQ96DP5 389 aaKnown RBP5.02□□□□□ -1.61
SCAF11-210ENST00000547654 MYOCQ99972 504 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 PNPLA8Q9NP80 782 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 STARD7Q9NQZ5 370 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 RRN3Q9NYV6 651 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 VSX1Q9NZR4 365 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-210ENST00000547654 RABGAP1Q9Y3P9 1069 aa5.02□□□□□ -1.61
SCAF11-210ENST00000547654 A0A087WV62 115 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 A0A0U1RQG5 324 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-210ENST00000547654 DYTNA2CJ06 578 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 CCDC154A6NI56 674 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 FTLP02792 175 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-210ENST00000547654 CFIP05156 583 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 RPLP2P05387 115 aaKnown RBP5.01□□□□□ -1.61
SCAF11-210ENST00000547654 RPL17P18621 184 aaKnown RBP5.01□□□□□ -1.61
SCAF11-210ENST00000547654 PTMSP20962 102 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 SLC6A4P31645 630 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 IL6STP40189 918 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-210ENST00000547654 PIK3CBP42338 1070 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 STT3AP46977 705 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 ALDH1A3P47895 512 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 CASP5P51878 434 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 CHN2P52757 468 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 GPSM2P81274 684 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 PPFIA1Q13136 1202 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 STARD3Q14849 445 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 SPDYE7PQ495Y7 208 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 THEMIS2Q5TEJ8 643 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 PGBD2Q6P3X8 592 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 MZT2AQ6P582 158 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 PDZD4Q76G19 769 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-210ENST00000547654 MIGA2Q7L4E1 593 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 RHOT2Q8IXI1 618 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 PQLC1Q8N2U9 271 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 CCDC89Q8N998 374 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 Q8NA96 180 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 NAXEQ8NCW5 288 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 FBXO18Q8NFZ0 1043 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 KLHDC4Q8TBB5 520 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 PHKBQ93100 1093 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 HDAC10Q969S8 669 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 RGMAQ96B86 450 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 PHACTR3Q96KR7 559 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 EIF2AK1Q9BQI3 630 aaKnown RBP5.01□□□□□ -1.61
SCAF11-210ENST00000547654 FBXO34Q9NWN3 711 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 NRBP1Q9UHY1 535 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 TPCN1Q9ULQ1 816 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 ATP11BQ9Y2G3 1177 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 CEP83Q9Y592 693 aa5.01□□□□□ -1.61
SCAF11-210ENST00000547654 LRRFIP2Q9Y608 721 aaKnown RBP5.01□□□□□ -1.61
SCAF11-210ENST00000547654 COL11A2P13942 1736 aaPredicted RBP5□□□□□ -1.61
SCAF11-210ENST00000547654 MAST3O60307 1309 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 M0R3H8 397 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 IGLV2-14P01704 120 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 ECHS1P30084 290 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 MPLP40238 635 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
SCAF11-210ENST00000547654 PDE1CQ14123 709 aaPredicted RBP5□□□□□ -1.61
SCAF11-210ENST00000547654 FAM209BQ5JX69 171 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 PPP4R3AQ6IN85 833 aa5□□□□□ -1.61
SCAF11-210ENST00000547654 ARHGEF25Q86VW2 580 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms