RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 LMBRD1Q9NUN5 540 aa6.12□□□□□ -1.43
USP25-209ENST00000547201 GPATCH2Q9NW75 528 aa6.12□□□□□ -1.43
USP25-209ENST00000547201 CHMP5Q9NZZ3 219 aa6.12□□□□□ -1.43
USP25-209ENST00000547201 SUCLA2Q9P2R7 463 aaPredicted RBP6.12□□□□□ -1.43
USP25-209ENST00000547201 DBR1Q9UK59 544 aaKnown RBP6.12□□□□□ -1.43
USP25-209ENST00000547201 CEP131Q9UPN4 1083 aa6.12□□□□□ -1.43
USP25-209ENST00000547201 HES2Q9Y543 173 aa6.12□□□□□ -1.43
USP25-209ENST00000547201 COL4A3BPQ9Y5P4 624 aa6.12□□□□□ -1.43
USP25-209ENST00000547201 AK5Q9Y6K8 562 aa6.12□□□□□ -1.43
USP25-209ENST00000547201 MORC2Q9Y6X9 1032 aaPredicted RBP6.12□□□□□ -1.43
USP25-209ENST00000547201 SPTBN5Q9NRC6 3674 aaKnown RBP6.11□□□□□ -1.43
USP25-209ENST00000547201 LAD1O00515 517 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 CSPG5O95196 566 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 FGFR1P11362 822 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 DARSP14868 501 aaKnown RBP6.11□□□□□ -1.43
USP25-209ENST00000547201 TFE3P19532 575 aaPredicted RBP6.11□□□□□ -1.43
USP25-209ENST00000547201 PBX3P40426 434 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 STAT6P42226 847 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 NPTX2P47972 431 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 PEX3P56589 373 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 RPL6Q02878 288 aaKnown RBP6.11□□□□□ -1.43
USP25-209ENST00000547201 COASYQ13057 564 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 PNOCQ13519 176 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 PDIA5Q14554 519 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 PLEKHG4Q58EX7 1191 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 BRDTQ58F21 947 aaPredicted RBP6.11□□□□□ -1.43
USP25-209ENST00000547201 NT5DC1Q5TFE4 455 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 KRT79Q5XKE5 535 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 HAUS3Q68CZ6 603 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 CDCA2Q69YH5 1023 aaPredicted RBP6.11□□□□□ -1.43
USP25-209ENST00000547201 Q7L0L9 218 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 SYT2Q8N9I0 419 aaPredicted RBP6.11□□□□□ -1.43
USP25-209ENST00000547201 RNF149Q8NC42 400 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 KIAA0895Q8NCT3 520 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 NEK9Q8TD19 979 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 RABGGTAQ92696 567 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 ACSF2Q96CM8 615 aaPredicted RBP6.11□□□□□ -1.43
USP25-209ENST00000547201 FAM167AQ96KS9 214 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 CELF4Q9BZC1 486 aaKnown RBP6.11□□□□□ -1.43
USP25-209ENST00000547201 GPR62Q9BZJ7 368 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 NXF3Q9H4D5 531 aaKnown RBP6.11□□□□□ -1.43
USP25-209ENST00000547201 ANKEF1Q9NU02 776 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 DUSP13Q9UII6 198 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 PADI3Q9ULW8 664 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 GDAQ9Y2T3 454 aa6.11□□□□□ -1.43
USP25-209ENST00000547201 TTC3P53804 2025 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 MROH7Q68CQ1 1323 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 KDM3AQ9Y4C1 1321 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 FRMD3A2A2Y4 597 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 RRN3P2A6NIE6 340 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 LRRIQ4A6NIV6 560 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 ANKRD63C9JTQ0 380 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 ETV2O00321 342 aaPredicted RBP6.1□□□□□ -1.43
USP25-209ENST00000547201 TLR3O15455 904 aaKnown RBP6.1□□□□□ -1.43
USP25-209ENST00000547201 SRFP11831 508 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 ARF4P18085 180 aaPredicted RBP6.1□□□□□ -1.43
USP25-209ENST00000547201 UBA7P41226 1012 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 TNFSF9P41273 254 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 SLC26A2P50443 739 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 NUCB2P80303 420 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 EGR3Q06889 387 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 CLLU1OSQ5K130 101 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 RRAGBQ5VZM2 374 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 ISM2Q6H9L7 571 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 TSHZ1Q6ZSZ6 1077 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 RPAINQ86UA6 219 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 TMEM173Q86WV6 379 aaPredicted RBP6.1□□□□□ -1.43
USP25-209ENST00000547201 DTWD2Q8NBA8 298 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 TMEM161BQ8NDZ6 487 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 PDZD8Q8NEN9 1154 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 CAGE1Q8TC20 777 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 KCNG4Q8TDN1 519 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 CYB5D2Q8WUJ1 264 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 MRPS27Q92552 414 aaKnown RBP6.1□□□□□ -1.43
USP25-209ENST00000547201 PAGE5Q96GU1 130 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 AK8Q96MA6 479 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 MED15Q96RN5 788 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 IFIH1Q9BYX4 1025 aaKnown RBP6.1□□□□□ -1.43
USP25-209ENST00000547201 TRIM9Q9C026 710 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 RNF32Q9H0A6 362 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 PDZD7Q9H5P4 517 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 CERS4Q9HA82 394 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 IL23AQ9NPF7 189 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 KBTBD4Q9NVX7 518 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 KIAA1522Q9P206 1035 aaPredicted RBP6.1□□□□□ -1.43
USP25-209ENST00000547201 ARHGAP28Q9P2N2 729 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 RAPGEFL1Q9UHV5 662 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 KCNH3Q9ULD8 1083 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 ST3GAL5Q9UNP4 418 aa6.1□□□□□ -1.43
USP25-209ENST00000547201 PTPRJQ12913 1337 aa6.09□□□□□ -1.43
USP25-209ENST00000547201 A0A1W2PQ27 194 aa6.09□□□□□ -1.43
USP25-209ENST00000547201 A0A1W2PQ64 194 aa6.09□□□□□ -1.43
USP25-209ENST00000547201 A0A1W2PQD8 194 aa6.09□□□□□ -1.43
USP25-209ENST00000547201 RFXAPO00287 272 aa6.09□□□□□ -1.43
USP25-209ENST00000547201 FAM189A1O60320 539 aa6.09□□□□□ -1.43
USP25-209ENST00000547201 PRPF6O94906 941 aaKnown RBP6.09□□□□□ -1.43
USP25-209ENST00000547201 BMP15O95972 392 aa6.09□□□□□ -1.43
USP25-209ENST00000547201 HARSP12081 509 aaKnown RBP6.09□□□□□ -1.43
USP25-209ENST00000547201 CMA1P23946 247 aa6.09□□□□□ -1.43
USP25-209ENST00000547201 GUCY2CP25092 1073 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms