RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 NLRC5Q86WI3 1866 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 C5orf67F2Z3F1 127 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 O00370 1275 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 LCA5LO95447 670 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 MMEP08473 750 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 SLC8A3P57103 927 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 FMO1Q01740 532 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 DSG1Q02413 1049 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 UBE3AQ05086 875 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 ORC1Q13415 861 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 NFE2Q16621 373 aaPredicted RBP16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 INTS6LQ5JSJ4 861 aaKnown RBP16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 LCLAT1Q6UWP7 414 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 RAD9BQ6WBX8 426 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 C4orf50Q6ZRC1 276 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 TMEM35BQ8NCS4 154 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 MYCBPAPQ8TBZ2 947 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 SLC20A1Q8WUM9 679 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 TFAP2BQ92481 460 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 CYFIP2Q96F07 1278 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 TGS1Q96RS0 853 aaKnown RBP16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 C11orf84Q9BUA3 381 aaPredicted RBP16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 LHX5Q9H2C1 402 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 DPEP3Q9H4B8 488 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 ACP6Q9NPH0 428 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 BACE2Q9Y5Z0 518 aa16.81■□□□□ 0.28
TRAFD1-203ENST00000547063 VWA8A3KMH1 1905 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 A0A087X0T9 212 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 LCHNA4D1U4 455 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 CCP110O43303 1012 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 FAM228BP0C875 321 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 CHRNB2P17787 502 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 ACAT1P24752 427 aaKnown RBP16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 SNX16P57768 344 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 PSMD5Q16401 504 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 RTP2Q5QGT7 225 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 ALKBH5Q6P6C2 394 aaKnown RBP16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 FAM171BQ6P995 826 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 VPS52Q8N1B4 723 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 KLHL23Q8NBE8 558 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 MSANTD4Q8NCY6 345 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 SLC30A5Q8TAD4 765 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 RIN2Q8WYP3 895 aaPredicted RBP16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 NOX5Q96PH1 765 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 HNRNPABQ99729 332 aaKnown RBP16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 RTP3Q9BQQ7 232 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 MRPL17Q9NRX2 175 aaKnown RBP16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 MTRRQ9UBK8 725 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 NAGPAQ9UK23 515 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 NME7Q9Y5B8 376 aa16.8■□□□□ 0.28
TRAFD1-203ENST00000547063 GRXCR1A8MXD5 290 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 DDX3XO00571 662 aaKnown RBP eCLIP16.79■□□□□ 0.283e-8■■■□□ 18.8
TRAFD1-203ENST00000547063 CA3P07451 260 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 CCDC175P0C221 793 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 SETSIPP0DME0 302 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 NSFP46459 744 aaKnown RBP16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 BCAT1P54687 386 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 PSMC1P62191 440 aaKnown RBP16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 MLLT1Q03111 559 aaPredicted RBP16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 CLEC16AQ2KHT3 1053 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 MDH1BQ5I0G3 518 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 CCDC122Q5T0U0 273 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 PPP1R26Q5T8A7 1209 aaPredicted RBP16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 FAM109BQ6ICB4 259 aaPredicted RBP16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 C12orf29Q8N999 325 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 ANKRD52Q8NB46 1076 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 LNX1Q8TBB1 728 aaPredicted RBP16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 C2orf15Q8WU43 125 aaKnown RBP16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 MED10Q9BTT4 135 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 VN1R3Q9BXE9 311 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 MIS12Q9H081 205 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 ZCWPW1Q9H0M4 648 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 CRTAC1Q9NQ79 661 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 FAM49BQ9NUQ9 324 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 SPTLC3Q9NUV7 552 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 GTF3C4Q9UKN8 822 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 TSPAN16Q9UKR8 245 aa16.79■□□□□ 0.28
TRAFD1-203ENST00000547063 GBF1Q92538 1859 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 M0QYV0 167 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 ZSCAN12O43309 604 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 HCRTO43612 131 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 TBC1D4O60343 1298 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 RTN2O75298 545 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 CYP1A1P04798 512 aaPredicted RBP16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 CDH5P33151 784 aaPredicted RBP16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 ERVK-21P61565 698 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 GFPT1Q06210 699 aaPredicted RBP16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 MTF1Q14872 753 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 GOLGA7BQ2TAP0 167 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 KIAA0319Q5VV43 1072 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 SLC8B1Q6J4K2 584 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 TAS1R1Q7RTX1 841 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 SPATA2LQ8IUW3 424 aaPredicted RBP16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 OR10T2Q8NGX3 314 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 SLC2A14Q8TDB8 520 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 TRIM11Q96F44 468 aa16.78■□□□□ 0.28
TRAFD1-203ENST00000547063 FUBP3Q96I24 572 aaKnown RBP eCLIP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms