RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 AAK1Q2M2I8 961 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 PHLDB3Q6NSJ2 640 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 RRAGAQ7L523 313 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 ACOT1Q86TX2 421 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 B3GALNT2Q8NCR0 500 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 VN1R2Q8NFZ6 395 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 SLC7A14Q8TBB6 771 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 PGLYRP2Q96PD5 576 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 SFXN1Q9H9B4 322 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 ABCB6Q9NP58 842 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 APEX2Q9UBZ4 518 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 CD207Q9UJ71 328 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 KIAA1257Q9ULG3 409 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 ATP8B3O60423 1300 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 CCDC195A0A1B0GUA6 201 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 ATP2C2O75185 946 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 XYLBO75191 536 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 LRG1P02750 347 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 RFX1P22670 979 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 HOXA9P31269 272 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 LTBRP36941 435 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 PSMC1P62191 440 aaKnown RBP14.66□□□□□ -0.06
PTCH1-213ENST00000546820 RBM10P98175 930 aaKnown RBP14.66□□□□□ -0.06
PTCH1-213ENST00000546820 FANCCQ00597 558 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 CYP27A1Q02318 531 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 KCNMA1Q12791 1236 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 PUS10Q3MIT2 529 aaKnown RBP14.66□□□□□ -0.06
PTCH1-213ENST00000546820 MDH1BQ5I0G3 518 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 ATAT1Q5SQI0 421 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 ARHGEF19Q8IW93 802 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 ELMOD1Q8N336 334 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 ATAD1Q8NBU5 361 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 CMASQ8NFW8 434 aaPredicted RBP14.66□□□□□ -0.06
PTCH1-213ENST00000546820 TMEM176AQ96HP8 235 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 FUBP3Q96I24 572 aaKnown RBP eCLIP14.66□□□□□ -0.06
PTCH1-213ENST00000546820 HEXIM2Q96MH2 286 aaKnown RBP14.66□□□□□ -0.06
PTCH1-213ENST00000546820 PRKD2Q9BZL6 878 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 ADAM7Q9H2U9 754 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 PIDD1Q9HB75 910 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 PLCB1Q9NQ66 1216 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 RTN4Q9NQC3 1192 aaKnown RBP14.66□□□□□ -0.06
PTCH1-213ENST00000546820 ABI2Q9NYB9 513 aaPredicted RBP14.66□□□□□ -0.06
PTCH1-213ENST00000546820 CLEC1BQ9P126 229 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 FAM50BQ9Y247 325 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 DAAM1Q9Y4D1 1078 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 PCDHB4Q9Y5E5 795 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 SZT2Q5T011 3432 aa14.66□□□□□ -0.06
PTCH1-213ENST00000546820 MTCL1Q9Y4B5 1905 aaKnown RBP14.65□□□□□ -0.06
PTCH1-213ENST00000546820 HCRTO43612 131 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 SEC24AO95486 1093 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 TPM3P06753 285 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 EPHB3P54753 998 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 UBASH3AP57075 661 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 RPL10AP62906 217 aaKnown RBP14.65□□□□□ -0.06
PTCH1-213ENST00000546820 DLX2Q07687 328 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-213ENST00000546820 MGAT5BQ3V5L5 792 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 CFAP221Q4G0U5 840 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 ZNF394Q53GI3 561 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 RARS2Q5T160 578 aaKnown RBP14.65□□□□□ -0.06
PTCH1-213ENST00000546820 KLHDC7AQ5VTJ3 777 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 VSTM1Q6UX27 236 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 APTXQ7Z2E3 356 aaKnown RBP14.65□□□□□ -0.06
PTCH1-213ENST00000546820 RNF214Q8ND24 703 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 PCED1BQ96HM7 432 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 MSLNLQ96KJ4 702 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 ZNF512Q96ME7 567 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-213ENST00000546820 RIPOR3Q96MK2 946 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 ERGIC2Q96RQ1 377 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 PKMYT1Q99640 499 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 SEPT5Q99719 369 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-213ENST00000546820 ARID3AQ99856 593 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 MED10Q9BTT4 135 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 LSM14BQ9BX40 385 aaKnown RBP14.65□□□□□ -0.06
PTCH1-213ENST00000546820 DPEP3Q9H4B8 488 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 CRTAC1Q9NQ79 661 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 TMLHEQ9NVH6 421 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 SLC27A5Q9Y2P5 690 aa14.65□□□□□ -0.06
PTCH1-213ENST00000546820 H3BQ06 376 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-213ENST00000546820 TBX10O75333 385 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 RFPL2O75678 378 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 PAEPP09466 180 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 HAPLN1P10915 354 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-213ENST00000546820 MAGEA11P43364 429 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 RAD23BP54727 409 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 NR1I3Q14994 352 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 VEPH1Q14D04 833 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 SYCP1Q15431 976 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 ARHGAP44Q17R89 818 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 LEXMQ3ZCV2 418 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 IQCEQ6IPM2 695 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 SYCE2Q6PIF2 218 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 TMEM270Q6UE05 265 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 TMC5Q6UXY8 1006 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 GPR149Q86SP6 731 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 C12orf76Q8N812 135 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-213ENST00000546820 NEK11Q8NG66 645 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 WHAMMQ8TF30 809 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 CYFIP2Q96F07 1278 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 RHOBTB2Q9BYZ6 727 aa14.64□□□□□ -0.07
PTCH1-213ENST00000546820 ELOVL4Q9GZR5 314 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms