RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CD58P19256 250 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 TRIM21P19474 475 aaKnown RBP17.95■□□□□ 0.46
LTBR-215ENST00000546296 NDST1P52848 882 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 EPHB3P54753 998 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 CYP27A1Q02318 531 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 MAN2A1Q16706 1144 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 MDH1BQ5I0G3 518 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 FAM171BQ6P995 826 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 C4orf50Q6ZRC1 276 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 GRASPQ7Z6J2 395 aaPredicted RBP17.95■□□□□ 0.46
LTBR-215ENST00000546296 EHBP1Q8NDI1 1231 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 FAM200AQ8TCP9 573 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 FAXDC2Q96IV6 333 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 TNIP3Q96KP6 325 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 ZNF512Q96ME7 567 aaPredicted RBP17.95■□□□□ 0.46
LTBR-215ENST00000546296 TUBGCP2Q9BSJ2 902 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 PHF7Q9BWX1 381 aaPredicted RBP17.95■□□□□ 0.46
LTBR-215ENST00000546296 BCO2Q9BYV7 579 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 RHOBTB2Q9BYZ6 727 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 CRISPLD1Q9H336 500 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 DPEP3Q9H4B8 488 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 FANCLQ9NW38 375 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 HSFX1Q9UBD0 423 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 YIPF1Q9Y548 306 aa17.95■□□□□ 0.46
LTBR-215ENST00000546296 SOAT2O75908 522 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 EEF1GP26641 437 aaKnown RBP17.94■□□□□ 0.46
LTBR-215ENST00000546296 TCP11X2Q5H9J9 407 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 IQCEQ6IPM2 695 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 UNC93AQ86WB7 457 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 TTC9BQ8N6N2 239 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 B3GALNT2Q8NCR0 500 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 MYCBPAPQ8TBZ2 947 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 ADAMTS19Q8TE59 1207 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 RPGRIP1Q96KN7 1286 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 NT5C1BQ96P26 610 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 PKMYT1Q99640 499 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 POMKQ9H5K3 350 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 CRTAC1Q9NQ79 661 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 PRKAG3Q9UGI9 489 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 NME7Q9Y5B8 376 aa17.94■□□□□ 0.46
LTBR-215ENST00000546296 PAPLNO95428 1278 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 TPM2P07951 284 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 POU2F2P09086 479 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 HAPLN1P10915 354 aaPredicted RBP17.93■□□□□ 0.46
LTBR-215ENST00000546296 PTPN2P17706 415 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 CDK11BP21127 795 aaKnown RBP17.93■□□□□ 0.46
LTBR-215ENST00000546296 CYP2F1P24903 491 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 NTHL1P78549 312 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 VEPH1Q14D04 833 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 TAF12Q16514 161 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 CCDC142Q17RM4 750 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 ZSCAN23Q3MJ62 389 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 VWA3BQ502W6 1294 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 GBP6Q6ZN66 633 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 ACOT1Q86TX2 421 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 ADHFE1Q8IWW8 467 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 TTC39CQ8N584 583 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 AOPEPQ8N6M6 819 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 ANKRD20A12PQ8NF67 263 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 MYLPFQ96A32 169 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 LPIN3Q9BQK8 851 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 CORO1BQ9BR76 489 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 CRACR2AQ9BSW2 395 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 MED10Q9BTT4 135 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 INTS2Q9H0H0 1204 aaKnown RBP17.93■□□□□ 0.46
LTBR-215ENST00000546296 WDR6Q9NNW5 1121 aaKnown RBP17.93■□□□□ 0.46
LTBR-215ENST00000546296 ABCB6Q9NP58 842 aa17.93■□□□□ 0.46
LTBR-215ENST00000546296 SMTNL1A8MU46 457 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 SP100P23497 879 aaPredicted RBP17.92■□□□□ 0.46
LTBR-215ENST00000546296 FSHRP23945 695 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 TBXAS1P24557 533 aaPredicted RBP17.92■□□□□ 0.46
LTBR-215ENST00000546296 YWHAEP62258 255 aaKnown RBP17.92■□□□□ 0.46
LTBR-215ENST00000546296 RPL10AP62906 217 aaKnown RBP17.92■□□□□ 0.46
LTBR-215ENST00000546296 ORC1Q13415 861 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 CUL2Q13617 745 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 PABPC1LQ4VXU2 614 aaKnown RBP17.92■□□□□ 0.46
LTBR-215ENST00000546296 CDKAL1Q5VV42 579 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 ITIH5Q86UX2 942 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 SCN4BQ8IWT1 228 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 PPM1KQ8N3J5 372 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 FUBP3Q96I24 572 aaKnown RBP eCLIP17.92■□□□□ 0.46
LTBR-215ENST00000546296 UHRF1Q96T88 793 aaPredicted RBP17.92■□□□□ 0.46
LTBR-215ENST00000546296 NT5C1AQ9BXI3 368 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 NDST4Q9H3R1 872 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 CISHQ9NSE2 258 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 HCFC1R1Q9NWW0 138 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 GCNT4Q9P109 453 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 DNMT3BQ9UBC3 853 aaKnown RBP17.92■□□□□ 0.46
LTBR-215ENST00000546296 NR2E1Q9Y466 385 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 TSC2P49815 1807 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 CLUHO75153 1309 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 UNC80Q8N2C7 3258 aa17.92■□□□□ 0.46
LTBR-215ENST00000546296 BECN2A8MW95 431 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 BDNFP23560 247 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 SSTR3P32745 418 aaPredicted RBP17.91■□□□□ 0.46
LTBR-215ENST00000546296 ZNF165P49910 485 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 INCA1Q0VD86 236 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 CFAP221Q4G0U5 840 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 CYP4A22Q5TCH4 519 aa17.91■□□□□ 0.46
LTBR-215ENST00000546296 CRYBG2Q8N1P7 616 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms