RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 ZBTB41Q5SVQ8 909 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 PPHLN1Q8NEY8 458 aaKnown RBP12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 TNIP3Q96KP6 325 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 EPAS1Q99814 870 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 TBC1D23Q9NUY8 699 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 CYTH3O43739 400 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 ATP9AO75110 1047 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 IREB2P48200 963 aaKnown RBP12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 MTMR2Q13614 643 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 BOLA3Q53S33 107 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 SPOUT1Q5T280 376 aaKnown RBP12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 SWT1Q5T5J6 900 aaKnown RBP12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 XRRA1Q6P2D8 792 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 AGBL1Q96MI9 1066 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 TMEM121Q9BTD3 319 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 SHOC2Q9UQ13 582 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 CNTNAP4Q9C0A0 1308 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 E2F8A0AVK6 867 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 SNX3O60493 162 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 GLRA3O75311 464 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 IL18RAPO95256 599 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 ARP10275 920 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 AQP5P55064 265 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 TRMT5Q32P41 509 aaKnown RBP12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 TXNRD3Q86VQ6 643 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 CDC26Q8NHZ8 85 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 SHCBP1LQ9BZQ2 653 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 SNX9Q9Y5X1 595 aa12.74□□□□□ -0.37
NPC1L1-204ENST00000546276 JCADQ9P266 1359 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 SRP72O76094 671 aaKnown RBP12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 ATP6V1B1P15313 513 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 TCN1P20061 433 aaPredicted RBP12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 GARTP22102 1010 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 TMEM132DQ14C87 1099 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 IZUMO2Q6UXV1 221 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 PRUNE1Q86TP1 453 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 SLC26A11Q86WA9 606 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 MYLK2Q9H1R3 596 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 LRCH1Q9Y2L9 728 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 PSMD3O43242 534 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 FKBP6O75344 327 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 SUPT3HO75486 399 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 BGNP21810 368 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 MAP4P27816 1152 aaKnown RBP12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 PCYT1AP49585 367 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 BTKQ06187 659 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 PDK1Q15118 436 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 FAXCQ5TGI0 409 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 STK32AQ8WU08 396 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 POP1Q99575 1024 aaKnown RBP12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 NT5C1AQ9BXI3 368 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 TEX13BQ9BXU2 312 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 PLEKHA5Q9HAU0 1116 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 PCDH9Q9HC56 1237 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 NSMCE4AQ9NXX6 385 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 DGKIO75912 1065 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 NPTX2P47972 431 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 NUDT2P50583 147 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 SNX30Q5VWJ9 437 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 ZNF772Q68DY9 489 aaPredicted RBP12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 CRELD2Q6UXH1 353 aaPredicted RBP12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 MCOLN2Q8IZK6 566 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 PCYOX1LQ8NBM8 494 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 TMEM237Q96Q45 408 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 SIK2Q9H0K1 926 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 DNALI1O14645 258 aaPredicted RBP12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 CACNA2D1P54289 1103 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 SLC34A1Q06495 639 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 ARHGEF19Q8IW93 802 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 ABI1Q8IZP0 508 aa12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 INPP4AQ96PE3 977 aaPredicted RBP12.73□□□□□ -0.37
NPC1L1-204ENST00000546276 DFFAO00273 331 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 SHBGP04278 402 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 DRD4P21917 467 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 HSD17B4P51659 736 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 CNGA2Q16280 664 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 TWF2Q6IBS0 349 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 TEX2Q8IWB9 1127 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 FAM151AQ8WW52 585 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 SEPT1Q8WYJ6 367 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 PTPRN2Q92932 1015 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 ZMAT2Q96NC0 199 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 BTBD10Q9BSF8 475 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 ZNF518BQ9C0D4 1074 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 DNAJC18Q9H819 358 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 XPO1O14980 1071 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 EPHB2P29323 1055 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 HMGCS2P54868 508 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 VCPP55072 806 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 ABCE1P61221 599 aaKnown RBP12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 CYP24A1Q07973 514 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 SV2AQ7L0J3 742 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 IQCKQ8N0W5 287 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 THEM5Q8N1Q8 247 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 GLIS3Q8NEA6 775 aa12.72□□□□□ -0.37
NPC1L1-204ENST00000546276 UBA3Q8TBC4 463 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms